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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pumo11g01854
ATGTTGGTAGAAGATGCTATGGATGTTGATAATGGCCCAGACAGAAATGCAGAAGTTCTCTTTGATGAAGAAAAGGTGGCTCAACTGAAGGAGCTCTCAAAACGGCCAGATATGTATGAAATACTGACAAAGTCATTGGCTCCAAACATCTGGGAGCTAGATGATGTGAAGAAAGGTCTTCTTTGTCAGCTTTTTGGTGGCAACGCTTTGACGTTAGCTTCTGGTGCTAACTTTCGCGGCGATATAAATATTCTTCTCGTTGGTGATCCTGGGACAAGCAAGTCCCAGCTACTTCAATACATACACAAACTATCTCCACGTGGAATTTACACCAGTGGAAGGGGAAGTTCAGCAGTCGGATTGACTGCTTATGTAACCAAGGACCCTGAAACAGGAGAAACTGTTTTAGAGAGTGGTGCCCTCGTTTTGAGTGACCGAGGTATATGTTGTATTGACGAATTCGACAAAATGTCTGACAATGCAAGGAGCATGTTACATGAGGTGATGGAACAACAAACCGTTTCAATAGCAAAGGCAGGTATTATTGCTTCCCTCAGTGCTAGGACCTCGGTGTTGGCTTGTGCAAATCCAAGTGGGTCAAGATATAATCCTCGCTTGTCTGTCATTGACAACATACACCTTCCTCCCACTCTTTTGTCCAGATTTGATTTAATCTACTTGATGCTTGACAAGGCTGATGAACAGACTGACAGGCGCCTTGCCAAACATATTGTGTCCCTACACTTTGAGAATCCCGAGAACGTGGAGCAGGATGTGTTGGACATTTCTACATTAACTGATTATGTTAGCTATGCCCGAAAGCACATACACCCACAACTTTCTGATGAAGCTGCTGAAGAATTGACTAGAGGTTACGTAGAAATAAGAAAAAGAGGAAATTTTCCCGGGAGTAGCAAAAAGGTGATAACAGCAACACCAAGGCAGATTGAGAGTCTGATACGCCTAAGTGAAGCATTGGCTAGGATGCGCTTCTCTGAATGGGTTGAAAAGCAGTGA
1017
0.4366
MLVEDAMDVDNGPDRNAEVLFDEEKVAQLKELSKRPDMYEILTKSLAPNIWELDDVKKGLLCQLFGGNALTLASGANFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLSARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEQTDRRLAKHIVSLHFENPENVEQDVLDISTLTDYVSYARKHIHPQLSDEAAEELTRGYVEIRKRGNFPGSSKKVITATPRQIESLIRLSEALARMRFSEWVEKQ
338
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pumo11g01854
338
SUPERFAMILY
P-loop containing nucleoside triphosphate hydrolases
49
337
IPR027417
-
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein family signature
218
226
IPR001208
GO:0003677|GO:0005524|GO:0032508
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein family signature
139
153
IPR001208
GO:0003677|GO:0005524|GO:0032508
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein family signature
191
203
IPR001208
GO:0003677|GO:0005524|GO:0032508
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein family signature
79
94
IPR001208
GO:0003677|GO:0005524|GO:0032508
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein family signature
167
180
IPR001208
GO:0003677|GO:0005524|GO:0032508
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein 4 signature
200
217
IPR008047
GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pumo11g01854
338
PRINTS
Mini-chromosome maintenance (MCM) protein 4 signature
54
65
IPR008047
GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pumo11g01854
338
FunFam
DNA helicase
19
338
-
-
Pumo11g01854
338
SMART
mcm
1
338
IPR031327
GO:0003677|GO:0005524|GO:0032508
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pumo11g01854
Pumo-Chr11
50335370
50337486
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pumo11g01854
1
338
Core DNA Replication Machinery Family
AT2G16440
86.136
0.0
600
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pumo11g01854
K02212
-
gmx:100782586
645.58
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pumo11g01854
11
50335370
50337486
Pumo11g01854
11
50335370
50337486
ECH
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