Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01852 ATGGGAGAAGTAGCAGGTGGAGGCTGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCCATCGAATCCGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATGTAGATAAGAGTCCTTTTCAGCGGACCTATGCAGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTAGATTGCGTTTTTTCAAGGAACAAATGTTGAAGGCTGGTGTTTCACCAAAATATTCCACACCACCAGTTGATGTGAACATTGATGACCTTGAGGTAAAACTTACAGAAATTGACGCAGAGTTAACTGAGATGAATGCAAATGATGAAAAGTTGCAACGGTCATACAACGAGCTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGCGAGTTTTTCCACTCAGCTCAAAGCCTAGCCATAGAGCAGCAGAGAGAACAAGAATCACGTCATCTGAGTGGTGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTGTCTGGTGATTCATCAAAGCAAGTTAAGTTGGGATTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTGAGGCAGGCTACTGTTGAGGATCCCGTCACAGACCCTGTTTCTAGAGAAAAGACTGAGAAAAATGTTTTTGTGGTCTTCTATGGTGGTGAAAAAGTAAAAGCCAAGATTCTGAAAATATGTGAAGCCTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGGAAGCAAGTTCAAATGATTACAGAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTATAGATGCTGGACTACTGCATCGGGATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATGTTTTGGTGAGGAAGGAGAAATCTATTCATCATACCCTAAACATGCTGAGCCTTGATGTGACAAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACTAAGCAGATCCAGGATGCATTACAGCGGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTTTCCAAGTTTTGCAAACTAGGGAGTTGCCACCTACCTATTTCCGTACAAACAAATTTACTTCTTCTTTTCAAGGAATTATTGACTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCTACTGTGTATACTGTGGTTACCTTTCCATTTCTTTTTGCTGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGAGATGACTTTTGGTGGTCGTTATGTTATTTTGTTGATGGCAATATTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTTTCTGTCCCATTTGCAATCTTCGCTCCCTCTGCGTATGATTGTCGTGACCTTTATTGCAGGGATGCTACAACAGTGGGCCTGATAAAAGTGCGTGACACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGCTCACGAAGTGAACTACCATTCCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTAATGAGCTATTTCAATGCCATATTCTTTAGAAACAGCGTAAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATTATTGTCAAGTGGTGGACTGGTTCTCAAGCTGATTTGTACCATATTCTGATCTACATGTTCCTGAGCCCGACAGATGATTTGGGTGAGAACCAACTCTTTGTTGGTCAGAAATATCTGCAGCTTGCGCTTTTGCTTCTGGCTGTTATCTCTGTGCCCTGGATGCTATTGCCAAAACCTTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGCTGAATCCTATGCACCACTTCAAAGTACAGATGAGAGCTTGCAAGTGGAGTCAAACCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGTCTAGCTCATTCAGAGTTATCAAGTGTGTTCTATGAGAAGGTTCTGATGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTCTCATTGTCTTCATTTTCGCTACCGTCGGAGTGTTACTTGTCATGGAAACTCTAAGTGCCTTCTTGCATGCGTTACGTCTTCACTGGGTGGAGTTTCAAAACAAGTTTTATGAGGGCGATGGGTACAAGTTCCACCCTTTCTCGTTCTCCTTGCTGGATGAGGAGGAATGA 2457 0.4241 MGEVAGGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNVDKSPFQRTYAAQIKRCGEMARRLRFFKEQMLKAGVSPKYSTPPVDVNIDDLEVKLTEIDAELTEMNANDEKLQRSYNELVEYKLVLQKAGEFFHSAQSLAIEQQREQESRHLSGESMETPLLQDQELSGDSSKQVKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPVSREKTEKNVFVVFYGGEKVKAKILKICEAFGANRYPFAEELGKQVQMITEVSGRLLELKTTIDAGLLHRDNLLNTIGAQFEQWDVLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAALDSNSQVNAIFQVLQTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILLMAIFSIYTGFIYNEFFSVPFAIFAPSAYDCRDLYCRDATTVGLIKVRDTYPFGVDPVWHGSRSELPFLNSLKMKMSILLGVAQMNLGIVMSYFNAIFFRNSVNVWFQFIPQMIFLNSLFGYLSLLIIVKWWTGSQADLYHILIYMFLSPTDDLGENQLFVGQKYLQLALLLLAVISVPWMLLPKPFILKKQHEARHGAESYAPLQSTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLLDEEE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01852 818 PANTHER VACUOLAR PROTON ATPASES 15 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo11g01852 818 Coils Coil 101 121 - -
Pumo11g01852 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo11g01852 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01852 Pumo-Chr11 50323482 50332588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01852 13 818 Primary Pumps ATPases(2) AT4G39080 78.218 0.0 1308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01852 K02154 - gmx:100810062 1526.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01852 11 50323482 50332588 Pumo11g01852 11 50323482 50332588 ECH