Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01844 ATGAAAGAGCGAGTACTACTGCGAAGCAAGAGAGACATGAGAAGCTGTGTGTGTTACACGCTTTTATTGTTTGTTTTCTTCATATGGCTCGGCGTGGCAACGTGCTCTTCGTTCAGTGACATGGATGCGTTGCTGAAGCTGAAGGAGTCCATGAAGGGAGACAAAGCCAAAGACGACGCCCTCCATGACTGGAAGTTTTCCATGTCGCTTCCAGCACACTGTTCATTTTCAGGCGTAACATGCGATAAAGACCTTCGAGTTGTTGCTATCAACGTCTCGTTTGTTCCTCTCTTCGGCTACCTTCCGCCGGAGATCGGACAATTGGACAAACTCAAGAACCTCACCATAGCGCAGGACAACCTCACCGGCGAACTTCCCAAGGAGCTCACTGCCCTCACTTCGCTCAAGCTCCTCAACATCTCTCATAACAGCTTCTCTGGCAATTTCTCCGGCGAAATCATCCTTCCGATGACCGAGCTCGAGGTCCTCGACGTCTACGACAACAACTTCACCGGACCGCTTCCGGAAGAGTTCGTGAAACTGGAGAAACTAAGATACCTGAAGCTCGACGGAAACTATTTCTCCGGCAGCATACCGGAGAGTTACTCGGAGTTTAAGACCTTGGAATTTTTGAGCTTAAGCACCAACAATCTATCGGGGAAGATTCCCAAGAGTTTGTCTAAGTTGAAGACGCTGAGGTATCTCAAACTCGGATACTACAACGCTTACGAAGGTGGAATTCCACCGGAGTTCGGCAGCATGAAATCTCTGAAATACCTTGAGCTCTCTAGCTGCAACCTCAGCGGCGAGATTCCACCGAGTCTTGCAAATTTGACAAACCTTGACACGCTGTTCTTGCAAATGAACAACCTCACCGGAACCATTCCGTCGGAGCTCTCCGCTATGGTGAGCCTCATGTCACTGGATCTCTCCTTCAACGGCCTCACCGGGGAGATACCGATGAGCTTCTCTCGGCTTAGAAACCTAACTCTCATGAACTTCTTCCACAACAATCTCCGCGGCTCTGTTCCCTCCTTCATCGGCGAGCTTCCCAATCTGGAAACACTGCAGCTCTGGGAGAACAACTTTTCCTTCGTGCTGCCTCAGAACCTTGGACAAAACGGCAAGTTCAAGTTCTTCGACGTCACGAAGAACCACTTAACCGGGTTGATCCCTCGGGATTTGTGCAAGAGTGGGAAGTTACAAACCTTCATGATCACCGATAACTTCTTCCGCGGTCCAATCCCTGACGAGATTGGTAACTGCAAGTCTCTCACCAAGATCCGAGTCTCCAATAACTACCTTAACGGCGCGGTTCCGTCTGGGATTTTCAAACTACCTTCCGTCATTATAATCGAGCTGGCCAATAACCGTTTTAACGGGGAACTGCCTCCCGAGATTTCCGGCGATTCTCTCGGGATTCTCACGCTTTCCAACAACTTATTCACGGGCAGAATTCCGCCAGCGTTGAAGAACTTGAGGGCACTGCATAATCTGTTACTTGACGCGAACGAGTTCGTTGGAGAAATCCCGAGCGAGGTTTTTGAGTTACCGATGTTGACCACGGTCAACATAAGCGGCAACAATCTCACTGGGCCAATCCCAACGACGTTGACTCGCTGCGTTTCACTTACTGCCGTTGACCTGAGCCGGAACATGCTTGTTGGGGAGATTCCCAAGGGGATAAAAAACCTGACGGACTTAAGCATTTTCAATGTGTCCATAAACCAAATTTCTGGGCCAGTTCCTGATGAGATTCGCTTCATGTTGAGTCTCACCACGCTGGATCTGTCCTACAACAAATTCTTGGGCATGGTCCCAACCGGGGGTCAGTTCTTGGTATTCAGCGAGAAGTCGTTTGCAGGGAATCCCAACCTCTGCACCTCCCACTCTTGCCCTAATTCCTCGATGTTCCCTGACGACGCCTTGAGAAATAGAGGTGGCCCTTGGAGTTCGAAATCGACGAGGGTGATAGTCATCGTGATTGCACTCGCCACCGCGGCGCTGCTGGTGGTGGTGACGGTGTACATGATGAGGAGGAGGAAGCTGCACCGTGCGATGACGTGGAAGCTGACAGCGTTCCAGCGGCTGAACTTTAAAGCCGAGGACGTGGTGGAGTGTCTGAAGGAGGAGAACATAATAGGGAAAGGAGGAGCCGGGATCGTGTACCGCGGGTCCATGCCAAACGGAACTGACGTAGCAATAAAGCGGTTGGTTGGAGCGGGGAGTGGGAGGAACGATTACGGGTTCAAAGCGGAGATAGAGACGCTGGGGAAGATAAGGCACAGGAACATAATGAGGCTTTTAGGTTACGTGTCTAACAAGGAGACGAACTTGCTGCTGTATGAGTACATGCCAAATGGGAGCTTGGGGGAGTGGCTGCATGGGGCTAAGGGAGGACACTTGAGGTGGGAGATGAGGTACAAGATTGCGGTGGAAGCTGCCAAAGGACTCTGCTACTTGCACCATGATTGTTCCCCTCTTATCATTCACAGGGATGTGAAATCCAATAATATATTGCTCGATGCTGACTTTGAGGCCCATGTCGCTGATTTTGGGCTTGCCAAGTTCTTGTACGACCCCGGTGCCTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCATACACGCTGAAAGTGGACGAGAAAAGTGATGTGTACAGCTTTGGCGTGGTGCTGTTGGAACTGATAATAGGGAGGAAGCCAGTGGGGGAGTTTGGAGATGGGGTGGACATCGTTGGATGGGTCAACAAAACCAGATTGGAGCTGTCTCAGCCGTCGGATGCAGCGTTAGTGTTGGCAGTGGTGGATCCAAGGCTGAGTGGGTATCCATTGACAAGTGTCATTTATATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGGCCCGCTAGGCCTACCATGAGGGAAGTCGTTCATATGCTCTCAAATCCTCCTCACTCTACCACTCACACTCACAACCTAATTAATCTCTAG 3000 0.505 MKERVLLRSKRDMRSCVCYTLLLFVFFIWLGVATCSSFSDMDALLKLKESMKGDKAKDDALHDWKFSMSLPAHCSFSGVTCDKDLRVVAINVSFVPLFGYLPPEIGQLDKLKNLTIAQDNLTGELPKELTALTSLKLLNISHNSFSGNFSGEIILPMTELEVLDVYDNNFTGPLPEEFVKLEKLRYLKLDGNYFSGSIPESYSEFKTLEFLSLSTNNLSGKIPKSLSKLKTLRYLKLGYYNAYEGGIPPEFGSMKSLKYLELSSCNLSGEIPPSLANLTNLDTLFLQMNNLTGTIPSELSAMVSLMSLDLSFNGLTGEIPMSFSRLRNLTLMNFFHNNLRGSVPSFIGELPNLETLQLWENNFSFVLPQNLGQNGKFKFFDVTKNHLTGLIPRDLCKSGKLQTFMITDNFFRGPIPDEIGNCKSLTKIRVSNNYLNGAVPSGIFKLPSVIIIELANNRFNGELPPEISGDSLGILTLSNNLFTGRIPPALKNLRALHNLLLDANEFVGEIPSEVFELPMLTTVNISGNNLTGPIPTTLTRCVSLTAVDLSRNMLVGEIPKGIKNLTDLSIFNVSINQISGPVPDEIRFMLSLTTLDLSYNKFLGMVPTGGQFLVFSEKSFAGNPNLCTSHSCPNSSMFPDDALRNRGGPWSSKSTRVIVIVIALATAALLVVVTVYMMRRRKLHRAMTWKLTAFQRLNFKAEDVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGAGSGRNDYGFKAEIETLGKIRHRNIMRLLGYVSNKETNLLLYEYMPNGSLGEWLHGAKGGHLRWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTRLELSQPSDAALVLAVVDPRLSGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLSNPPHSTTHTHNLINL 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01844 999 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 154 241 - -
Pumo11g01844 999 Pfam Leucine rich repeat 495 554 IPR001611 GO:0005515
Pumo11g01844 999 SMART serkin_6 708 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01844 999 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 785 998 - -
Pumo11g01844 999 SMART LRR_typ_2 157 180 IPR003591 -
Pumo11g01844 999 SMART LRR_typ_2 493 517 IPR003591 -
Pumo11g01844 999 SMART LRR_typ_2 589 612 IPR003591 -
Pumo11g01844 999 SMART LRR_typ_2 446 470 IPR003591 -
Pumo11g01844 999 SMART LRR_typ_2 278 302 IPR003591 -
Pumo11g01844 999 SMART LRR_typ_2 350 374 IPR003591 -
Pumo11g01844 999 SUPERFAMILY L domain-like 391 629 - -
Pumo11g01844 999 SUPERFAMILY Protein kinase-like (PK-like) 697 983 IPR011009 -
Pumo11g01844 999 Gene3D Ribonuclease Inhibitor 242 346 IPR032675 -
Pumo11g01844 999 Gene3D Ribonuclease Inhibitor 349 636 IPR032675 -
Pumo11g01844 999 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 242 346 - -
Pumo11g01844 999 ProSiteProfiles Protein kinase domain profile. 708 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01844 999 Pfam Leucine Rich Repeat 256 278 IPR001611 GO:0005515
Pumo11g01844 999 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 677 784 - -
Pumo11g01844 999 Pfam Protein tyrosine and serine/threonine kinase 709 982 IPR001245 GO:0004672|GO:0006468
Pumo11g01844 999 Gene3D Phosphorylase Kinase; domain 1 672 784 - -
Pumo11g01844 999 SUPERFAMILY RNI-like 90 412 - -
Pumo11g01844 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Pumo11g01844 999 Gene3D Transferase(Phosphotransferase) domain 1 785 996 - -
Pumo11g01844 999 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 208 984 - -
Pumo11g01844 999 Pfam Leucine rich repeat N-terminal domain 39 82 IPR013210 -
Pumo11g01844 999 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 637 - -
Pumo11g01844 999 Gene3D Ribonuclease Inhibitor 39 151 IPR032675 -
Pumo11g01844 999 Gene3D Ribonuclease Inhibitor 152 241 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01844 Pumo-Chr11 50284741 50288522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01844 35 992 Receptor kinase-like Gene Family AT1G75820 63.163 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo11g01844 PK_Tyr_Ser-Thr 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01844 K00924 - gmx:732625 1788.08