Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01838 ATGCAGGAGAAAATGACAAATACTGAGTTATTGTCAGCAGTGGTGAAGTCTCTAACAAGAGACACTGAAGAGAGGAGGGAAGCAGTGGGACTGTTGCTAGGACTCTCTGACCTTCCTGCAGTTAGACGGAAGATTGGAAGAATTCAGGGGTGTATTGTTATGCTAGTTTCTATCCTGAATGGAGTTGACCCTGTTGCTTCACGTGATGCAGCAAAGTTGTTGGATATACTATCAAATAATAATCAAAATGCTCTTCTTATGGCTGAGGCTGGTTACTTTGGGCCGCTAGTGCAGTATTTGGATAAAGGTGATGCATAA 318 0.4277 MQEKMTNTELLSAVVKSLTRDTEERREAVGLLLGLSDLPAVRRKIGRIQGCIVMLVSILNGVDPVASRDAAKLLDILSNNNQNALLMAEAGYFGPLVQYLDKGDA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01838 105 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 103 - -
Pumo11g01838 105 Gene3D - 1 105 IPR011989 -
Pumo11g01838 105 SUPERFAMILY ARM repeat 3 104 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01838 2 103 U-box Gene Family AT1G68940 33.333 4.55e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01838 K08332 - gmx:102664566 184.882