Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01833 ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCATCTCTGCTTCAGAACTCTGGTTCTGAGGAGGATTTGCAGGCAGTGATGGATCAGAGAAAGAGGAAGAGAATGATATCAAATCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGATGATCTCGTTTCCCAAGTGGCTCAGCTCAGAAAAGAGAATCAACAGATACTCACAAGCGTTAACATCACCACACAACAGTATCTAAGCGTTGAGGCTGAGAACTCAGTGCTGAGGGCTCAGGTGGGAGAGTTGAGTCACAGGTTAGAGTCTCTCAACGAGATCGTTGAAGTGTTGAATGCCACCACTTATGGAGCAGCAGCATCGAGTTCCTTCATTGAGCCAACGAATAATATTAATGGCTTCTTCAACCCGTTGAATATGGGGTATCTGAACCAGCCTATCATGGCTTCTGCAGACATATTGCAGTATTGA 474 0.4662 MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVEVLNATTYGAAASSSFIEPTNNINGFFNPLNMGYLNQPIMASADILQY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01833 157 MobiDBLite consensus disorder prediction 1 49 - -
Pumo11g01833 157 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Pumo11g01833 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pumo11g01833 157 MobiDBLite consensus disorder prediction 24 49 - -
Pumo11g01833 157 FunFam BZIP transcription factor 28 79 - -
Pumo11g01833 157 Coils Coil 46 73 - -
Pumo11g01833 157 Gene3D - 28 83 - -
Pumo11g01833 157 Pfam bZIP transcription factor 30 77 IPR004827 GO:0003700|GO:0006355
Pumo11g01833 157 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pumo11g01833 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 155 - -
Pumo11g01833 157 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pumo11g01833 157 MobiDBLite consensus disorder prediction 1 23 - -
Pumo11g01833 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01833 Pumo-Chr11 50227018 50227491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01833 24 157 bZIP Transcription Factor Family AT4G34590 56.738 1.97e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g01833 bZIP_1 2.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01833 K25786 - gmx:100101862 257.684