Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01829 ATGACTCCCAAACTCCAAACCGTAGTCTCGACGGCGGCGTCCGTGGCGGCCACCGTGATGCTACTCCGCTCCCTCGCCCGCGACTACATCCCACCGGAGCTCCACCACTATCTCCGCTCCAAACTCTCCAAACTCATCTCTTCCTTCTCCTCCGAACTCACTCTCGTCATCGACGAGTTCCACGAGCTCACGCCAAACCCGCTCTTCACCGCCGCGCAGCTCTACCTCAAACCCCACGCCGCGCCGGACACAAAACGCTTCCGCGCCACCATGCCTCCGAAATCGCGCCACGTGTCCCTCCTGGTGGACCGCAACGAAGAAACCACCGACACCTTCAACGGCGTCTCGTTCCGGTGGAAGCTCGTGTCCCAGCGCGTCCCGACGAAGTTCATCCAGCACGACCCGTTCCACGCCTCTTCCAAGTCGGAGATGCGGTACTTCGAGCTGCGGTTCCACAAGAAGCACAGGGACATGGTCCTCTCGGAGTACCTGCCGCGCGTGATGGAGGAGGCCGAGGAGGCGCGTCAACGAAGGAAGACGCTGAAGCTCTTCACGCCGAGGGACATGAGGATGGTGGGAGGGAGAGGGCGCGACATGTGGCAGGGCGTGAATCTGGACCATCCTGCTACGTTTGAGACTCTGGCGATGGATTTGGAAATGAAGGAGATGATAATGGGGGATTTGGATAGGTTTGTGGAGAGGAAGGGTTTGTATAAGAGTGTTGGAAAGGCTTGGAAAAGAGGCTACTTGCTTTCGGGTCCTCCTGGGACTGGGAAATCTAGTTTGATTGCTGCTATGGCCAATTATCTGAATTTTGATGTGTATGACTTGGAGCTCACTGATGTTAGGCGAAATTCTGATCTCAGGAAGTTGTTGATTGCTACTGAGAATCGCTCTATTCTTGTTGTGGAGGATATTGATTGTTCACTTGAATTGCATAATAGGCTTGCAAAAGCAAAAGCAAAAGCAAAAGCAAAATCATCACAGTCCGTCGCTATGACCCCATGGTCTTTCCACCCACATGACAATCCAAAACCCCAGGTGACGTTATCGGGGTTCCTGAATTTCATAGATGGTTTATGGTCTAGTTGTGGGGATGAGAGGATCATAGTGTTCACGACCAATCACAAGGACAAATTGGACCCTGCTCTGTTGCGTCCTGGCCGCATGGATGTGCATATCGACATGACTTACTGCACCCCATGTGGGTTCAAAATGCTGGCTTCTAATTACCTCGGGATCACAGAGCACCCACTTTTTGTTGAAATTGAGAGATTACTAAAGACAACCAATGTGACTCCTGCGGAGGTGGGGGAGCAGTTTTTGAAGAATGAAGACCCGGTAATTGCCCTCGAAAGCCTTATGGAGCTCCTTGTAGAGAAGGGACGGAATCATGAAAAGAACAAAGCAGCTCTCACCATTGAATGA 1428 0.5245 MTPKLQTVVSTAASVAATVMLLRSLARDYIPPELHHYLRSKLSKLISSFSSELTLVIDEFHELTPNPLFTAAQLYLKPHAAPDTKRFRATMPPKSRHVSLLVDRNEETTDTFNGVSFRWKLVSQRVPTKFIQHDPFHASSKSEMRYFELRFHKKHRDMVLSEYLPRVMEEAEEARQRRKTLKLFTPRDMRMVGGRGRDMWQGVNLDHPATFETLAMDLEMKEMIMGDLDRFVERKGLYKSVGKAWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELTDVRRNSDLRKLLIATENRSILVVEDIDCSLELHNRLAKAKAKAKAKSSQSVAMTPWSFHPHDNPKPQVTLSGFLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHIDMTYCTPCGFKMLASNYLGITEHPLFVEIERLLKTTNVTPAEVGEQFLKNEDPVIALESLMELLVEKGRNHEKNKAALTIE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01829 475 Pfam Domain associated at C-terminal with AAA 30 122 IPR025753 -
Pumo11g01829 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 438 IPR027417 -
Pumo11g01829 475 ProSitePatterns AAA-protein family signature. 368 386 IPR003960 GO:0005524|GO:0016887
Pumo11g01829 475 PANTHER BCS1 AAA-TYPE ATPASE 10 462 - -
Pumo11g01829 475 CDD RecA-like_BCS1 224 396 - -
Pumo11g01829 475 Gene3D - 201 394 IPR027417 -
Pumo11g01829 475 Gene3D - 395 462 - -
Pumo11g01829 475 SMART AAA_5 245 400 IPR003593 GO:0016887
Pumo11g01829 475 Pfam ATPase family associated with various cellular activities (AAA) 250 396 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01829 Pumo-Chr11 50166613 50169201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01829 195 396 Calmodulin-binding Proteins AT3G56690 23.611 5.43e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01829 K08900 - gmx:100789716 803.512