Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01810 ATGGCCTCAAGCTCTCTCAGCAAACAAAAGCCTTCTGACTCCTCTTGGACACCAAAACAGAACAAGCTGTTTGAAAAAGCACTTGCAAAATATGACAAGGATACCCCTGACCGCTGGCAGAATGTAGCCAAAGCAGTAGGTAGCAAATCTGCAGATGAAGTTAAGAGACACTATGAAATCCTCTTGGAGGATCTCAGACACATAGAGTCTGGCCGTGTTCCTCTTCCCAAGTACAAGTCCACAGGAACCAGCACCAATGTTGATGAAGAAGAGAGGCTTCTGAAGTATCTTAAACTGAATTGA 303 0.4455 MASSSLSKQKPSDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVGSKSADEVKRHYEILLEDLRHIESGRVPLPKYKSTGTSTNVDEEERLLKYLKLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01810 100 MobiDBLite consensus disorder prediction 1 20 - -
Pumo11g01810 100 CDD SANT 15 62 IPR001005 -
Pumo11g01810 100 FunFam Transcription factor SRM1 8 75 - -
Pumo11g01810 100 Gene3D - 7 75 - -
Pumo11g01810 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Pumo11g01810 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Pumo11g01810 100 Coils Coil 93 100 - -
Pumo11g01810 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Pumo11g01810 100 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Pumo11g01810 100 SMART sant 12 64 IPR001005 -
Pumo11g01810 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 87 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01810 Pumo-Chr11 49948555 49950389 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo11g01810 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01810 - - gmx:100798314 190.66