Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01704 ATGCCCGATAATCCACCGAAAAACAGAGGCCACAGACGCGCCCATTCTGAGATTCTGACCCTTCCCGACGACATCACCTTCGACACTGATCTGGCCCTGGGCGACGGCGACGACGACGACGACGACTTGCTCTCCCTCTACCTCCAAATCGATCAACTCAATCCCTCCCCACTGCCTCCTCCTCAACCCAGGGTTAGACACCAACACAGCCACTCCATGGATGGCTCCACATCCATCCAACCGGAGATGCTCGTCTCCTCCGCTGCCTGCATTGATACCAAAAAGGCAATGTCTGCTGACAAGCTTGCTCAGCTTGCCTTAATTGATCCCAAGCGGGCTAAAAGGATATGGGCAAACAGACAGTCTGCTGCAAGATCAAAAGAAAGGAAGATGCGTTACATTTCCGAGCTTGAAAGGAAAGTGCAGACATTGCAAACAGAAGCAACTTCCTTGTCTGCACAATTTACTCTCTTGCAGAGAGACACAAATGGACTGACTGCTGAGAACAGTGAGTTGAAGTTGCGGTTGCAAACCATGGAGCAACAGGTCCACTTGCAAGATGCATTAAATGATGCATTAAAAGACGAAATTCAGCATTTGAAAGCACTGACTGGACAAGTTATGCCAAATGGAGGACCTATAAATTTTGCTTCATTTGGTGGGGGGCAACAATTCTATCCCAATAATCAGTCTATGCACACTCTTTTAGCTGCACAACAGTTTCAACAACTTCAAATTCATTCCCAGAAGCAGCAGCATCAACTTCAGCAGCAACAGCAGTTTCAGCAGCATCAACTTCAGCAGCAACAACAGTTTCACCAGCATCAACTACAGCAGCAACTGCAACAGCAACAACAACAACAACAACAACAAACAGCAGCAACAAATGGGGGACTTGAATAG 903 0.4762 MPDNPPKNRGHRRAHSEILTLPDDITFDTDLALGDGDDDDDDLLSLYLQIDQLNPSPLPPPQPRVRHQHSHSMDGSTSIQPEMLVSSAACIDTKKAMSADKLAQLALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQFTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKDEIQHLKALTGQVMPNGGPINFASFGGGQQFYPNNQSMHTLLAAQQFQQLQIHSQKQQHQLQQQQQFQQHQLQQQQQFHQHQLQQQLQQQQQQQQQQTAATNGGLE 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01704 300 Coils Coil 274 294 - -
Pumo11g01704 300 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 291 - -
Pumo11g01704 300 SUPERFAMILY Leucine zipper domain 111 162 IPR046347 GO:0003700|GO:0006355
Pumo11g01704 300 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Pumo11g01704 300 MobiDBLite consensus disorder prediction 272 300 - -
Pumo11g01704 300 Coils Coil 162 196 - -
Pumo11g01704 300 Coils Coil 127 154 - -
Pumo11g01704 300 FunFam probable transcription factor PosF21 110 163 - -
Pumo11g01704 300 Pfam bZIP transcription factor 111 161 IPR004827 GO:0003700|GO:0006355
Pumo11g01704 300 CDD bZIP_plant_RF2 112 161 IPR044759 GO:0003700|GO:0006355
Pumo11g01704 300 MobiDBLite consensus disorder prediction 52 79 - -
Pumo11g01704 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Pumo11g01704 300 Gene3D - 110 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01704 Pumo-Chr11 48670386 48673901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01704 1 238 bZIP Transcription Factor Family AT1G06070 65.704 3.35e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g01704 bZIP_1 1.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01704 - - gmx:100810942 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04094 4 81635258 81638258 Pumo11g01704 11 48670386 48673901 PCT