Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01693 ATGGGTTCTAATCAACCTTACTGCTGGGGTAGCAGTGCCTACATTGAAATGGGAGTGCCTCAACCTATGATCAAAGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTCTGTGGCTTGAGGAAACCTATGACTGGAAGACACAGGAACATTTCCTCGGTTGATTGCTGGGGCTACAACATGACCAAGAACTATGTGTTTGGTGGACAGATTCAATCAATCTCAGCAGGTTCTGAATTCAATTGTGGCCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTAGTGATTAGTTTGATTCCTAATGACATGAGATTCCAGAAAATTTCAGCTGGGGGGTACCATGTGTGTGGAATCTCAGAAGGGGTGAACTCCAAAACTGTTTGTTGGGGGAGAAGCTTGGACCTTGAGGAAGAAATTTCAGTGTCACATGCAGGTCAAGGAAATGTTGATTTGGCACCAAGTGACCCCATGCTCTCTGTAGTGGGAGGGAAATTCCATGCATGTGGCATTAAGAGCTATGACCGTGGTGTGATTTGTTGGGGCTTTATCATCAAACCAAGCACTCCATCTCCTAAAGGGATTAAGGTTTTTGAGGTTGCTGCTGGTGATTACTTTACTTGTGCTGTTCTTGCTGAGAAATCTCTTATGCCTGCATGTTGGGGTGTTGATTTTCCCACCTCTCTTCCTTTAGCTGTTTCACCAGGAATGTGCCAACCTGCTCCATGTCCTCCTGGTTCCTATGCCAATGATCAGCATAAGAGTCTTTGCAAGTCACCAGATTCTCGTGTTTGCACGAGGTGCAGTGGTGCTTGTCCTCCTGAAATGTATCTGAAGAGTGCGTGCAATTTGGCTTCTGATAGAGTATGTGAATATAACTGTTCTTCTTGTTCTTCATCCGAATGCTTCTTGAACTGCTCCTCTTCATATTCCAATGCTGCTGCCACTGAGAAGAAAACTGAAAAATTTTGGGCATTGCAGCTGCCAGTTGTTATTGCTGAGATTGCTTTTGCAGTTTTCATAGTTAGTATTGTGTCAATAACTGCAGTTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAAAGGTGAAGAAGCTTAATGGGAATTCTTCCCTCCAAAACGAGAACAAGGTCAGGCCAGACTTGGAGGAATTTAAGATCAGAAGGGCTCAAATGTTCACCTATGAGGAGCTTGAAAGTGCAACCGGTGGATTCAAGGAAGAGTCCATAGTAGGGAAGGGAAGTTTTTCTTGTGTGTTCAAGGGAGTTTTGAAAGATGGGACAGTTGTTGCTGTCAAAAGGGCCATAGTGTCCCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGATTGAACCATGCCCATTTGCTCAACCTTCTAGGGTATTGTGAAGAAGGAGGAGAGAGGCTTCTTGTGTATGAGTTCATGGCTCATGGCTCTTTGCACCAACACTTGCATGGAAAAAACCAAGTGTTGAGGGAACAGTTAGATTGGATAAGAAGGGTGACAATTGCAGTCCAAGCAGCACGTGGAATTGAATATTTGCATGGCTATGCTTGCCCTCCTGTGATTCACAGAGACATCAAGTCCTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGCTTATCATTGTTAGGTCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTCTTGGCTATCTTGATCCTGAGTACTATAGGCTTCACTACCTCACAACCAAATCTGATGTTTATAGCTTTGGTGTTCTCCTTTTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATCAAGTCAGGAGATATAACTGCAATTTTGGACCCGGTTTTGAAGCCTCCTCCTGATCTTGAAGCATTGAAGAGAATAGCCAATGTGGCTTGTAAGTGTGTGAGAATGAGAGGGAAAGAGAGGCCCTCAATGGATAAAGTAACAACTGCTTTGGAGAGAGGGCTTGCACAGTTGATGGGTAGTCCATGCATTGAGCAGCCAATTTTGCCCACTGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAAGGTCTTCAAACAGGTCAGTTTCTGAGACTGATGTGGCAGAAGCTGAGGACCAAAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCCAGTGTGACATCTTCTCAAAGGAGAAAGTCATCAGTGTCTGAGGCGGATGTTGATGGGAAGAATAATGCAGAAGGGAAGAACTTGGGCAATGTTGGAGGGGGAGGTGATGTTTTGAGAAGCCTTGAGGAAGAGATTGGTCCTGCTTCTCCAAGAGAGAGGCTGTTCTTGCAGCACAACTTCTAA 2454 0.4474 MGSNQPYCWGSSAYIEMGVPQPMIKGAQYLEISAGDYHVCGLRKPMTGRHRNISSVDCWGYNMTKNYVFGGQIQSISAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPNDMRFQKISAGGYHVCGISEGVNSKTVCWGRSLDLEEEISVSHAGQGNVDLAPSDPMLSVVGGKFHACGIKSYDRGVICWGFIIKPSTPSPKGIKVFEVAAGDYFTCAVLAEKSLMPACWGVDFPTSLPLAVSPGMCQPAPCPPGSYANDQHKSLCKSPDSRVCTRCSGACPPEMYLKSACNLASDRVCEYNCSSCSSSECFLNCSSSYSNAAATEKKTEKFWALQLPVVIAEIAFAVFIVSIVSITAVLYVRYRLRDCECSKGSKVKKLNGNSSLQNENKVRPDLEEFKIRRAQMFTYEELESATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNQVLREQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITAILDPVLKPPPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSVSETDVAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNNAEGKNLGNVGGGGDVLRSLEEEIGPASPRERLFLQHNF 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01693 817 FunFam serine/threonine-protein kinase-like protein CCR1 388 495 - -
Pumo11g01693 817 MobiDBLite consensus disorder prediction 759 807 - -
Pumo11g01693 817 FunFam Receptor protein kinase CRINKLY4 496 698 - -
Pumo11g01693 817 Gene3D Phosphorylase Kinase; domain 1 376 495 - -
Pumo11g01693 817 MobiDBLite consensus disorder prediction 719 735 - -
Pumo11g01693 817 ProSitePatterns Protein kinases ATP-binding region signature. 424 446 IPR017441 GO:0005524
Pumo11g01693 817 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 250 298 IPR001368 GO:0005515
Pumo11g01693 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Pumo11g01693 817 SUPERFAMILY Protein kinase-like (PK-like) 398 691 IPR011009 -
Pumo11g01693 817 ProSiteProfiles Protein kinase domain profile. 418 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01693 817 Gene3D - 2 238 IPR009091 -
Pumo11g01693 817 Pfam Protein tyrosine and serine/threonine kinase 421 690 IPR001245 GO:0004672|GO:0006468
Pumo11g01693 817 Gene3D Transferase(Phosphotransferase) domain 1 496 699 - -
Pumo11g01693 817 MobiDBLite consensus disorder prediction 719 741 - -
Pumo11g01693 817 SUPERFAMILY RCC1/BLIP-II 3 191 IPR009091 -
Pumo11g01693 817 SMART serkin_6 418 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01693 817 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01693 Pumo-Chr11 48588749 48591473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01693 1 817 Receptor kinase-like Gene Family AT3G59420 68.689 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo11g01693 PK_Tyr_Ser-Thr 3.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01693 - - gmx:100797455 1578.15