Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01692 ATGGGGCACAGTTCGAAGAAGAAGAAGCGCGGCGGCGGGAGCGGTCGCCGGAGCAAGGGGAGAACGCAGTCCAAAGATCACGCTGCTCAATTTGGCGCCGACGATTACGACCAGCTCTCCGAAGAGATTACTGCATTATGCGCAATTTTCGAAGACGACTGCAAGGTTTTTCCAGGATCGCCTCCTCGAGTAGTTATTAAGCTCAGGCCTTACTCGAAGGACATGGGTTATGAGGACTTAGATGTTTCTGCTGTTCTTGTTGTCAGGTGCTTGCCTGGGTATCCCTTCAAGTGCCCCAAGTTGCAGATTACTCCGGAGAAAGGGTTATCCGAAACTGATGCTGATAAGCTTTTGTCTCTCCTCCAAGATCAGGCTACTTTAAATGCTAGGGAAGGACGCGTAATGATCTATAATTTGGTAGAGGCTGCTCAAGAATTTCTGTCTGGTATTGAGCCAATTGCCAAATCAAATGATTCTAAGGTTTTACACTCGACGGTGGAAAGCAATGAAGAATTGTTTCCCAAAGATATGGCATCTTTAAATAAGAAGGGTTCTTTTGTTTACGGTTTTATAGACCTTTTCAGTGGCTGTGGAGAAACATGGAGTTGGGGTTTTGGATTGGATGAAACTGCAGGAAAAAGTTCTTCTCTTTCTCCATCTAAGTTAGATGCCTCAAAACTGCGGGAGAAGAAACCTGATAGTAAGGAAACACCATTAATAATGCAAGAACTTCCTGCCAAATTAGATACTGTTGGAGAAGTTAGTGAAGACAGCAACAATAGTTTATCTTTGACTCCTTCAAGTAGATCTTTGGTGGAGAATTTTGTAGGGAACGACAATGAAGGTGAGAAAGAGTATTTTATCGTTGATGATTATACAACAGAAGATAATGAAGGTATTAATGAAAGTGAGTCTTCAGAGTCTTTGTCTTCTGAATCCTTGCCTCATCACCAACCATCTCAAACAGTTGAAAAGGATCTAATAATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAGGGAACATTGGGTGACTGTTTGCCACAAATGGTAACAGAGCTGTACAATTTAGGGATCATTTCTGACTCAGCATGTGATATGGCATCTGAACCACCTTCCATTTTCAACAAAACCTTTGATCGTGTGTTCCAGAAACACCTGGCTTCATCCAGAATATCTCAATTTTGGAAACCTGATCTTGGAGGCTCAAACACAGTTCCCCATAGTTCTCGATATTTGAATGATTTTGAGGAGCTACGCCCTCTTGGTCATGGTGGTTTTGGTCATGTCGTATTGTGCAAAAATAAACTTGATGGAAGGCAGTATGCAGTAAAGAAAATTCGCCTCAAGGACAAAAGCATGCCTGATCGAATACTAAGGGAAGTGGCTACACTTTCTCGTTTACAGCATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTACGGTGATACTGCTTGGGGTTCAAAGACTACAGTTAGCTCTACTTTCAGCTACAAAGCTGCAACCTCCAACGATGCCATTGGGCATGAGAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGCCAAATAGTGGAAGGTTTGGTACACATACATGGTCAAGGAATAATTCATCGGGACTTGACACCAAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTGGGCCATCCTGCTGATGCAACTGGAGTTTCCATTGAAGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATCTGAAACAGAAAGGGGAAGTTCCACCTACTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTGCTGCGGCAGTTAATGTTTCCAGCTCCTTCAGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTTCCTCAACGAATGGAGTCTGAATTATTGGATGATATCCTACGAACAATGCAGAAATCAGAGGATACAAGCATATATGATAAAGTTTTAAATGCTATCTTTGACGAAGAGATGTTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGATCAGTTGGAGATAACAGTTCATCCATTCAGTATACAGAATTCGAAACTGAGGTTCGAGATTATGTTGTAGATATGAACAGGGAAATTTTCAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAATGCGATTATTGGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACCCATGGAGGAGACATGCTTGAACTTTGCCATGAGTTGCGTTTGCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTCAGAAGAGCAGTTGGTCATTCATCACCAAACCACTACCTTCAGGGAGATTTTGACATTATTGGTGGTACCTCAGCACTGACAGAAGCAGAGGTCATAAAGGTCACAAGGGACATAGTCACTTGTTTTTTCCATGCAGACTCATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATTGGAATCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTTGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGATTCTGTGGACCTGCTGATCAGGCACTCCCCCGATTAAGAGGAGCTCTTCCATCTGATAAACGTGCATTCAAGGCACTTGATGAATTGACTGAGCTTGTCAGTCTCCTGAGAATTTGGAGGATTGACAAAAATATCTATATAGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAGAACAGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTATTTGCTTCATCAGTTGTGGAGTAGTGACTATAAAGGAAATCCTCCCACTGGTGTGGGGACTAGCCTTGCACTGGAGACAATAATTCAGAACTGTCCTGTAGATTTCAAGCCCAATAGAAACGAAGCCAGCACCAATATTCTTGTCTGTTCTAGAGGAGGAGGTGGTCTTCTGGTGGAGCGCATGGAGCTAGTTGCTGAATTATGGGAGGAGAACTTTAAGGCTGAATTTGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGTCTAGTCATCATCACAGATACAAATATCTCCTTGACAGATTCTGTTAAGGTTCGACACCTTGAACACAAGAAGGAGAAAAATGTTGAGAGAAAAAAACTAGTCAAGTTTCTATCGGATGCTATGGCAACACAATTTAGAAATCCCTCTATTTGGATTTGA 3693 0.4189 MGHSSKKKKRGGGSGRRSKGRTQSKDHAAQFGADDYDQLSEEITALCAIFEDDCKVFPGSPPRVVIKLRPYSKDMGYEDLDVSAVLVVRCLPGYPFKCPKLQITPEKGLSETDADKLLSLLQDQATLNAREGRVMIYNLVEAAQEFLSGIEPIAKSNDSKVLHSTVESNEELFPKDMASLNKKGSFVYGFIDLFSGCGETWSWGFGLDETAGKSSSLSPSKLDASKLREKKPDSKETPLIMQELPAKLDTVGEVSEDSNNSLSLTPSSRSLVENFVGNDNEGEKEYFIVDDYTTEDNEGINESESSESLSSESLPHHQPSQTVEKDLIMVHMLRLVCASKGTLGDCLPQMVTELYNLGIISDSACDMASEPPSIFNKTFDRVFQKHLASSRISQFWKPDLGGSNTVPHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDTAWGSKTTVSSTFSYKAATSNDAIGHENQLESTYLYIQMEYCPRTLRQMFESYNHFDKELAWHLFRQIVEGLVHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADATGVSIEGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPPTWVAEFPEQESLLRQLMFPAPSDRPSATELLQNAFPQRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIRQVGRLGSVGDNSSSIQYTEFETEVRDYVVDMNREIFRQHCAKHLEISTMRLLDDCPQFNRNAVKLLTHGGDMLELCHELRLPFVNWIISNQKSSFKRYEISCVFRRAVGHSSPNHYLQGDFDIIGGTSALTEAEVIKVTRDIVTCFFHADSCDIHLNHGDLLDAIWSWIGIKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGPADQALPRLRGALPSDKRAFKALDELTELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGALLAVGGRYDYLLHQLWSSDYKGNPPTGVGTSLALETIIQNCPVDFKPNRNEASTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIITDTNISLTDSVKVRHLEHKKEKNVERKKLVKFLSDAMATQFRNPSIWI 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01692 1230 Gene3D Bira Bifunctional Protein; Domain 2 778 1114 IPR045864 -
Pumo11g01692 1230 MobiDBLite consensus disorder prediction 303 319 - -
Pumo11g01692 1230 ProSiteProfiles Protein kinase domain profile. 416 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01692 1230 FunFam eIF-2-alpha kinase GCN2 404 532 - -
Pumo11g01692 1230 CDD STKc_EIF2AK4_GCN2_rpt2 409 716 - -
Pumo11g01692 1230 FunFam eIF-2-alpha kinase GCN2 30 157 - -
Pumo11g01692 1230 MobiDBLite consensus disorder prediction 211 239 - -
Pumo11g01692 1230 SUPERFAMILY Protein kinase-like (PK-like) 412 744 IPR011009 -
Pumo11g01692 1230 FunFam eIF-2-alpha kinase GCN2 778 1114 - -
Pumo11g01692 1230 Pfam Protein kinase domain 416 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01692 1230 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Pumo11g01692 1230 Pfam Anticodon binding domain of tRNAs 1125 1222 IPR024435 -
Pumo11g01692 1230 Gene3D Transferase(Phosphotransferase) domain 1 535 729 - -
Pumo11g01692 1230 Pfam Histidyl-tRNA synthetase 866 1107 IPR041715 -
Pumo11g01692 1230 FunFam eIF-2-alpha kinase GCN2 536 729 - -
Pumo11g01692 1230 Gene3D Phosphorylase Kinase; domain 1 404 532 - -
Pumo11g01692 1230 MobiDBLite consensus disorder prediction 1 31 - -
Pumo11g01692 1230 SUPERFAMILY UBC-like 36 147 IPR016135 -
Pumo11g01692 1230 MobiDBLite consensus disorder prediction 1 16 - -
Pumo11g01692 1230 Pfam RWD domain 38 147 IPR006575 GO:0005515
Pumo11g01692 1230 MobiDBLite consensus disorder prediction 223 237 - -
Pumo11g01692 1230 FunFam Histidine--tRNA ligase, cytoplasmic 1121 1220 - -
Pumo11g01692 1230 ProSitePatterns Protein kinases ATP-binding region signature. 422 446 IPR017441 GO:0005524
Pumo11g01692 1230 MobiDBLite consensus disorder prediction 297 319 - -
Pumo11g01692 1230 SMART RWD2001b 41 150 IPR006575 GO:0005515
Pumo11g01692 1230 Gene3D - 1121 1220 IPR036621 -
Pumo11g01692 1230 ProSitePatterns Tyrosine protein kinases specific active-site signature. 571 583 IPR008266 GO:0004672|GO:0006468
Pumo11g01692 1230 PANTHER HISTIDYL-TRNA SYNTHETASE 774 1224 - -
Pumo11g01692 1230 SUPERFAMILY Class II aaRS and biotin synthetases 780 1109 IPR045864 -
Pumo11g01692 1230 Coils Coil 967 987 - -
Pumo11g01692 1230 Gene3D Ubiquitin Conjugating Enzyme 30 156 IPR016135 -
Pumo11g01692 1230 SUPERFAMILY Class II aaRS ABD-related 1126 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01692 Pumo-Chr11 48567665 48585156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01692 416 719 MAP Kinase Kinase Kinase AT1G63700 25.159 4.27e-21 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Pumo11g01692 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01692 K16196 - gmx:100797996 2298.86