Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01677 ATGAGTTCAGCAGCTTCCACTTCAGTGTGTGGAACTGAAGCCTCGAACCCTTCTCTCTCTCACACTCTTACACTTTTCTTACTAGCCATTTGGCATCCACTTGGAACAACCAAACGTGTTGCATTGCATGCTCACTCAAGTTTCACAGATTTCTGGTTTCAAATTCATACAAAGATGGAACTAGAAAGATCAATAGAGGACCAGTTCTCAAAGTTACACCCTTCCTTGCCAGAAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCAGCTTATGCACTAGCCAGGCTTGGTTATAAGAATATCACAGTTTTGGAGAAACATCATACGGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGGCAAGTTCTTGCAGCAAGCAGCGCTCCAGTCATTTTTCACTTGGCAAGAGAAACAGGCTCTGCACTAGAAGAATTGGACTCCCACAAGCTTGCTGTTATTGACCCTTCCTCTGGAAATTATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATCCAAGAAAAGGTGAAGAATTGTGGTCGTATTGGGGTCCATGCTGTTAGTGACATTGCTTCAGACTTAACTCCAGAATATCTTGAGCATCATGGACTCAAATCTATTCCTAAATCTGTAGCTTATGGCTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCCTACCTTCATGAGTTTACTAGAACGTCCATGGCTGGAAAAATTCGACGATTTAAAGATGGATATACTAGTCTTTGGCAGAAGATTGCTGAATTGCTTCCTTTAAAACTTTGCTGTAACATTGAAGTATTGGCAATCAGGAGGAACTCTGATGGTGTTACCGTTACTGTCAAGAGCTTAAATCAAGTTGAAACTTTGGAATTTGATAAGATCATAATCTCTGGCTCATTTCCATTAAAATATGGAAGAACTTACAGATCGTTACCTTCAACTTGCATAGAGTGTGAAACAGAAGTAATGGATGCAAGTGACCTTGAAAAGGATTTGTTCAGCAAAGTAGAGACAAATGACTACTACACCACCGTTTTAAAGATTAAAGGGCTACAACATTTGCCAGTTGGATTTTATTATTTTAGTGAATATATGGAAGATCCTAGCACAATTGGACATCCAGTTGCAATGCAGAGATTTTATGCTGACACTAATATATTCTTATTCTGGTCCTATGGAAACTCTGTTGATATTAAGGGACCAACAGTCACGAAGCTTGCAATCAAGACAATAGAAGCCATTGGGGGAGAGGTTGAGAATGTCATTCTTCAGCGCCGCTTTATGTATTTTCCTCATGTTGGCAGCCAAGATATGAAAGATGGGTTTTATGAAAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTATTATAATTTGTTTCCCTTGCAAGCTGAGTGCCAGAAAAAGAATCCTAGAGAATTAGGTGAATTGCCAGAAGTGCAATTTCCTAATTTGCCTACTTTGAATAGCTACTTAAAGCACTGGGGAACTCATCCAATCACTCAAAACAGGACTCTTTATACTTGGATTAATGAAGAAGGGACACCAGTATGCCAAAGGACCTATGGAGAACTATATTTTAATTCTTCTTGCATTGCTCATAAGCTCCTAACAAGCCAAAAGCCAGTTATCAAGCCAGGTGACAAGGTTCTGCTGGTCTATGTCCCTGGTTTGGATTTTATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTCCCCATTCTTCCTCCAGATCCCATGCAAAGAAATGGACAAGCACTAATTCAAATTGAAAATATTGCCAAGTCATGTAGCATTGTGGCAATTTTATCAACTGTAGCTTATCACTCAGCAGTCCGTGCAGGTTCTTTGAAAAATTTAATCTCATTAACTGGAAAAAATGGGAAATCCTCAGCTCGGTGGCCAAATCTTCCATGGTTGCACACTGGTACATGGGTCAAGAACTCCAAAAGTATGGTTTTGGAACATCTTGACAAACAATGTGAACCTCAGCCAGGTGATATATGTTTCTTGCAATTTACCTCAGGTTCAACTAGTGATGCTAAAGGAGTCATGATCACTCATGGTGGGCTAATTCACAATGTAAAGTTGATGCGAAAAAGATACAAGAGCACCTCAAGGACAATGCTAGTAAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGGGGACTTTTTACATCTCTTGTAAGTGGTGGATCTGCAGTTTTATTTTCACCAATGACATTTATTAAGAAACCACTCTTATGGCTTGAAACTATTAGCAAGTATCAAGCAACTCATAGCGCTGGCCCCAACTTTGCCTTTGAGTTACTGATTCGAAGATTGGAGTCCGACAAGGATAAGCTTCAGAATTTAGACCTTTCATCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACTCTGAAAAGATTTATTGAGCTAACAAGTCCTTTTGGCTTATCTGAAAAGGTGATGGCACCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGCTGTGCATTTGGAGAAGGTAAGCCAATCATTGTTGATTGGCAGGGAAGAGTTTGTTGTGGATATGTTAATCACGAGGATGCAGATGTTGGCATTAGAATAGTTGATCCAGAGACTCGTGAAGAGCTTCAAGAAGATTGTAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGCATAGGATACTGGGGAAGGGAAGAATTGAGTCAAAAAACATTCAGGAATGAACTTCATAATCATCCTGGACGTATCTACACAAGAACTGGAGACTTGGGACGAATAATAGATCAGAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCAGATGTTGAAAAGACAGTTGAGACTTCATCAGAATTTCTTCGTCCTGGTTGCTGTGCTGTCATTGGAATCCCTGAGGAAATTTTATCAGCAAAGGGGATTTCCATTCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGAAAGCCAGTCAGCAAAGATTTGATCGAGAAAATTAAGACTCAGGTGGTAGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGGTCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTGTCAAACAGTTCACAGATGAAACACTGAACTTGGTACCACAAGGTTCAAAACCTATTTTGACAAAGAAGTCTTTGTTAAGGTCATTCACTACAGGAACATGGGGAGAAGAAAAAACACCAAGGCCACAGCAAGTAAGAAGTATACTTGCACCTAGGAAAAGGATCAGTAAGAATGAAATTGTAGAGTTCTTGAAAGGACTTATTTCTGAGCAGACTGGAATCCCAGTTAACAACATCTCAGTCACAGACAACCTGACATCCTATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCTTAGGAACTCCAGTTGCAGCTATAGATGTTTTCACTGCATCCTGCATTCTAGAATTGGCTAACTTCTCTAAGGATCTTCTATCAAAGTCACAGCCTCAACTTTCAAGCAATCCATCCAATGTCCCAGAAGCTGAGAGTGATTCTACTGAATTGATTGTGGAGGTATCCAAGTCTCGCCAATTTGGTATCCATGTACTTCAACTCCTGGCACTCATTTATGTTTCTATCATGCTGGTATCTCCTGCATATCTGTCCATCACTACTTATCTAAATTTCATCGTAAGTGCCAGTAAATGGATAGATGGACTTTCCGGGTTAAATTACTTAATTTCCCTCACTTTTGCACCTGTTGCTTGGATTCTTTGCATTGCTTCTACTTGCATTTGCATTTCATTATTCAGAAGTTCTTTCTTGGGGCCAAACTATGCCCTTACCTCTGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGACACTATATAAGGCCCAAGAAATTTCTTCTAAAGTTCTCGCAATACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGACGCTGGGTGCAAGGATTGGATCCTCAGTTTTACTTGATACAGTTGACATCACTGATCCATCTTTGATGTCAATTGGAGATGAAGTTGTCATTGCTGAAGGTGTCTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTTTAAGTTTCCATCCTATTAGGATTGGCAAATGTTCTTCCATTGGACCTTATGCCGTTATCCAAAAAGGAAGTGTTATTGGAGAAGGTGCTGAGGTACAGGCCCTGCAAAAGGTTGGACAAGACCAACATAATGCAGAACTACCTATTATCAGCAAAACTCAATATGATATCATCTACCACTTTATGGGAATCTATCTTGTTGGCTTTCTCAGCTCACTTGCTGCGGTCATTGCCTACTTCTTATATATTAGGTTCTCCAAACAACCTCCATCACCCCAACACTTCACCTTTGTTTGCATATGTGGGGCCTTCCATTGGATCCCGTTTACAATCATTGCATATGCTACCATGTTTTCTGAAGTCTCATCAAACCCCATCACCTTTGCCATTTCATTTACCAGCGCCTACTTGCTTCATGGTTTCATACTCATCATTCTTACCACTGCTTTTACTCGTCTCCTCAAAACTAGTCAAAAGCAAACCCAATTTAAAACCCGACTTCGATGTCAAATGACAACTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCATATCCAGAGTTAATGTCAATTGGTGCTGGTGTCCATCTTGGAGATTTTAGCCGGATAATTACAGGTTTTCATTCTTCAAGTGGATATGTTAGTGGAAAAATTGAGGTTCAGGAAAATTCGGTTATAGGGAGTCAAAGTCTAATTCTCCCTGGTTCACTAGTCCAAAAGAATGTCATTCTTGGTGCACTTTCAGTTGCTCCAATGAATTCTACACTCCAAGAGGGTGGTGTCTACATTGGATCACAATCCCAAGTTGTCATAAGGAACTCAGTGAAGAATGCTTATGATGAAGGGATAGAAGAGATGGACATGGTAAGCAAGAAAAGTGTTAGTAATTTGGCTGCAGCATTGCACAAAAATGACTCCCAGAAAGTGACCTTGACCAGAACATGGTATCAGACCTTCTCAGCACTCTTAACTCAGCCACTGCTACAAACAGTGTTACCTCATATGGTGTTGGGTTTAGCAGTTTTTGCTCCATTGAACTGTATTGTTTACCTAAAGAGTGCCAAGAAGCTTCCAATATATTGGTTGCTTCCCTTGTTTTGGGTTCACTCAGGAGCCTTAGCCGCATTGGCGTGTGTGATAGCCAAATGGATTCTTGTAGGAAGGAAGAAAGCAGGTGAAGCAGTGCCTATATGGAGTCAAAGGATCACATTGGACAGCACATGGCAGGCCATTAGAACCTTAGTTGGAGACTATTTTATGGACATGACAAGTGGATCATTTTGGTTTGTGCTGTGGATGAAGTTGATGGGTGCAGATGTGGATATGGAACATGCAGTTTATGTAGATAGCATGGGAGCCTTATTGAACCCTGAGATGGTGAAGATTGAGAGAGGGGGTTGTGTAGGAAGAGAAGCATTGCTCTTTGGACATGTATATGAAGGGGAAGGAGGCATGGTGAAGTTTGGAGAGATCAAAATAGGAGAAGATGGGTTTGTAGGGAGTAGAGCAGTGGCCATGCCAGGTGTGCAATTAGAGAATGGTGGCAATCTTAGTGCTTTGTCACTTGCCATGAAAGAAGAAATCATTAGATCAAGGTGA 5958 0.407 MSSAASTSVCGTEASNPSLSHTLTLFLLAIWHPLGTTKRVALHAHSSFTDFWFQIHTKMELERSIEDQFSKLHPSLPENTRIGIVGAGPSGLSAAYALARLGYKNITVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLARETGSALEELDSHKLAVIDPSSGNYQDIKVADDYVSVMSLTLEIQEKVKNCGRIGVHAVSDIASDLTPEYLEHHGLKSIPKSVAYGYTASGYGFIQDMPYAYLHEFTRTSMAGKIRRFKDGYTSLWQKIAELLPLKLCCNIEVLAIRRNSDGVTVTVKSLNQVETLEFDKIIISGSFPLKYGRTYRSLPSTCIECETEVMDASDLEKDLFSKVETNDYYTTVLKIKGLQHLPVGFYYFSEYMEDPSTIGHPVAMQRFYADTNIFLFWSYGNSVDIKGPTVTKLAIKTIEAIGGEVENVILQRRFMYFPHVGSQDMKDGFYEKLESELQGSRNTYYNLFPLQAECQKKNPRELGELPEVQFPNLPTLNSYLKHWGTHPITQNRTLYTWINEEGTPVCQRTYGELYFNSSCIAHKLLTSQKPVIKPGDKVLLVYVPGLDFIDAFFGCLRAKVIPVPILPPDPMQRNGQALIQIENIAKSCSIVAILSTVAYHSAVRAGSLKNLISLTGKNGKSSARWPNLPWLHTGTWVKNSKSMVLEHLDKQCEPQPGDICFLQFTSGSTSDAKGVMITHGGLIHNVKLMRKRYKSTSRTMLVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELLIRRLESDKDKLQNLDLSSLTFLMVAAEPVRQKTLKRFIELTSPFGLSEKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRVCCGYVNHEDADVGIRIVDPETREELQEDCKEGEIWISSPSAGIGYWGREELSQKTFRNELHNHPGRIYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVETSSEFLRPGCCAVIGIPEEILSAKGISIPDGSDQVGLVVIAEVRDGKPVSKDLIEKIKTQVVEEHGVNVASVKLVKPRTISKTTSGKIKRFECVKQFTDETLNLVPQGSKPILTKKSLLRSFTTGTWGEEKTPRPQQVRSILAPRKRISKNEIVEFLKGLISEQTGIPVNNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCILELANFSKDLLSKSQPQLSSNPSNVPEAESDSTELIVEVSKSRQFGIHVLQLLALIYVSIMLVSPAYLSITTYLNFIVSASKWIDGLSGLNYLISLTFAPVAWILCIASTCICISLFRSSFLGPNYALTSEISIYSMDFVKWWTLYKAQEISSKVLAIHLRGTVFLKYWFETLGARIGSSVLLDTVDITDPSLMSIGDEVVIAEGVLVQSHEVKNGILSFHPIRIGKCSSIGPYAVIQKGSVIGEGAEVQALQKVGQDQHNAELPIISKTQYDIIYHFMGIYLVGFLSSLAAVIAYFLYIRFSKQPPSPQHFTFVCICGAFHWIPFTIIAYATMFSEVSSNPITFAISFTSAYLLHGFILIILTTAFTRLLKTSQKQTQFKTRLRCQMTTSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSYPELMSIGAGVHLGDFSRIITGFHSSSGYVSGKIEVQENSVIGSQSLILPGSLVQKNVILGALSVAPMNSTLQEGGVYIGSQSQVVIRNSVKNAYDEGIEEMDMVSKKSVSNLAAALHKNDSQKVTLTRTWYQTFSALLTQPLLQTVLPHMVLGLAVFAPLNCIVYLKSAKKLPIYWLLPLFWVHSGALAALACVIAKWILVGRKKAGEAVPIWSQRITLDSTWQAIRTLVGDYFMDMTSGSFWFVLWMKLMGADVDMEHAVYVDSMGALLNPEMVKIERGGCVGREALLFGHVYEGEGGMVKFGEIKIGEDGFVGSRAVAMPGVQLENGGNLSALSLAMKEEIIRSR 1985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01677 1985 ProSitePatterns Phosphopantetheine attachment site. 1173 1188 IPR006162 -
Pumo11g01677 1985 SUPERFAMILY Trimeric LpxA-like enzymes 1839 1978 IPR011004 -
Pumo11g01677 1985 Pfam NAD(P)-binding Rossmann-like domain 84 150 - -
Pumo11g01677 1985 SUPERFAMILY Trimeric LpxA-like enzymes 1368 1465 IPR011004 -
Pumo11g01677 1985 SUPERFAMILY FAD/NAD(P)-binding domain 78 329 IPR036188 -
Pumo11g01677 1985 PRINTS Adrenodoxin reductase family signature 105 118 - -
Pumo11g01677 1985 PRINTS Adrenodoxin reductase family signature 81 103 - -
Pumo11g01677 1985 CDD FAAL 519 1092 IPR040097 GO:0008610
Pumo11g01677 1985 Gene3D Hexapeptide repeat proteins 1362 1468 - -
Pumo11g01677 1985 Gene3D - 1134 1216 IPR036736 -
Pumo11g01677 1985 SUPERFAMILY ACP-like 1142 1224 IPR036736 -
Pumo11g01677 1985 Pfam AMP-binding enzyme 544 978 IPR000873 -
Pumo11g01677 1985 ProSitePatterns Putative AMP-binding domain signature. 700 711 IPR020845 -
Pumo11g01677 1985 SUPERFAMILY Trimeric LpxA-like enzymes 1619 1722 IPR011004 -
Pumo11g01677 1985 Pfam Phosphopantetheine attachment site 1149 1213 IPR009081 -
Pumo11g01677 1985 ProSiteProfiles Carrier protein (CP) domain profile. 1144 1218 IPR009081 -
Pumo11g01677 1985 Gene3D - 361 454 - -
Pumo11g01677 1985 Gene3D Hexapeptide repeat proteins 1613 1755 - -
Pumo11g01677 1985 Gene3D - 973 1101 IPR045851 -
Pumo11g01677 1985 Gene3D - 501 972 IPR042099 -
Pumo11g01677 1985 Gene3D - 81 483 IPR036188 -
Pumo11g01677 1985 Gene3D - 152 260 - -
Pumo11g01677 1985 SUPERFAMILY Acetyl-CoA synthetase-like 513 1097 - -
Pumo11g01677 1985 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 189 1757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01677 Pumo-Chr11 48141718 48151167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01677 696 1011 Monolignol Biosynthesis Gene Families AT1G20480 26.498 1.39e-17 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01677 - - adu:107477067 2962.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04063 4 81293881 81301607 Pumo11g01677 11 48141718 48151167 PCT