Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01661 ATGGATTCAGCAACAACAGCTCCTCCCCCGTCGCAGGAGCTGGACCTCGACAACCTCAAACCCCTCAAAGTCCTCGGAAAAGGTGCCATGGGCACTGTCTTCCTCGTACACGACGACACCAACAACAGCACCCCCTTCGCCCTCAAAGTCGTCGACAAAACGTGCGTCCACGCGAAGCTCGACGCGGAACGCCGCGCGCGTTGGGAAATCCAATTCTTAGCGTGGGCCCTACCGTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCTACCGCCAAACCGACCGCGCCTTCTCCCCCGCCGTCATCCGCTTCTACGTGGCGGAAATCCTCTGCGCGCTCGACCACCTCCATTCCATGGGCATCGCCTACCGCGACCTAAAACCCGAAAATGTCCTCGTCCAAAAATCGGGACACGTCACCCTCACCGATTTCGACCTCTCCCGCAAACTCAATCCCAAACCTAAACCTAAACCTAATCCTAATCCTAATCCTCCCGTTCCTTCAATTCCCTTGCCCGTTCCCGAACCTCGCCGAAAACACCGCCGGAATTTCTCCCGCTGGATCCCCCTCTTCCCGCCGGACGGGTCTCACAAAAACGGTCTCAAGAAGGCCAAGTCCGCACGAGTCAGCCCCGTGAGTCGGAGAAAACCGAGTTTCTCCAACGGCGAACGCTCCAACTCGTTCGTCGGTACCGAGGAGTACGTCTCGCCGGAGGTCGTCCGCGGCGACGGCCACGAGTTCGCCGTCGATTGGTGGGCGCTTGGAATACTAATCTACGAAATGCTCTACGGTACGACGCCGTTTAAGGGGAAGAATCGCAAGGAAACGTTTCGGAATGTTCTCACGAAGCCGCCGGAGTTCGTCGGAAAACGAACGGCGTTGACGGACCTTATTGAGAAGCTTTTGGAGAAGGATCCGGCGAAGCGGTTGGGGTACACGCGCGGCGCGGCGGAGATCAAGGAGCACGAGTTCTTCCGAGGGGTTCGGTGGGAGCTTTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGTCGCGGGACGACGGCGACGGAGATTCGAAGGAGAGGTTTTCCGACCGAAATTGTGGCGTTGATATTAGGGATTACTTTCAGAATCTTAAATCGTCGCCGTCGTTGCCGGCTTCGCCGTTGGCGTCGCCGTCGTGCCGGTTTAAGAAGAATGTTTCGCTAACAGAATTCTAA 1200 0.5808 MDSATTAPPPSQELDLDNLKPLKVLGKGAMGTVFLVHDDTNNSTPFALKVVDKTCVHAKLDAERRARWEIQFLAWALPYCPGGDLNVLRYRQTDRAFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLVQKSGHVTLTDFDLSRKLNPKPKPKPNPNPNPPVPSIPLPVPEPRRKHRRNFSRWIPLFPPDGSHKNGLKKAKSARVSPVSRRKPSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGTTPFKGKNRKETFRNVLTKPPEFVGKRTALTDLIEKLLEKDPAKRLGYTRGAAEIKEHEFFRGVRWELLTEVVRPPFIPSRDDGDGDSKERFSDRNCGVDIRDYFQNLKSSPSLPASPLASPSCRFKKNVSLTEF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01661 399 Gene3D Transferase(Phosphotransferase) domain 1 222 344 - -
Pumo11g01661 399 Pfam Protein kinase domain 220 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01661 399 Pfam Protein kinase domain 76 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01661 399 MobiDBLite consensus disorder prediction 144 177 - -
Pumo11g01661 399 Gene3D Phosphorylase Kinase; domain 1 3 73 - -
Pumo11g01661 399 MobiDBLite consensus disorder prediction 194 226 - -
Pumo11g01661 399 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Pumo11g01661 399 ProSiteProfiles Protein kinase domain profile. 19 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01661 399 FunFam Serine/threonine-protein kinase OXI1 223 344 - -
Pumo11g01661 399 Gene3D Transferase(Phosphotransferase) domain 1 80 151 - -
Pumo11g01661 399 SMART serkin_6 19 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01661 399 FunFam Serine/threonine-protein kinase OXI1 84 152 - -
Pumo11g01661 399 PANTHER FLIPPASE KINASE 1-RELATED 71 346 - -
Pumo11g01661 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pumo11g01661 399 MobiDBLite consensus disorder prediction 153 173 - -
Pumo11g01661 399 SUPERFAMILY Protein kinase-like (PK-like) 16 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01661 Pumo-Chr11 47997158 47998421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01661 14 399 AGC Kinase Gene Family AT3G20830 57.452 1.26e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo11g01661 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01661 - - gmx:100785281 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04042 4 81101633 81103689 Pumo11g01661 11 47997158 47998421 PCT