Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01659 ATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTATATTGTGCATCAACAATTGTGGATTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAATGCCACAAAGACATGTTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCATCCATTGGGAATATTATGAATGGATCATCAAGCAGCACTGAAAATGAACCTGTTGTTGCTGCTGCTAATGTTGATATCCCAGTCATTCCAGAAGAGCCTAAAACTGTCTCTGTGCAACCTTTATTTGGTTCAGGTTCAGAGGGGAGTGGTGAGGCAAAGCCGAAGGATGGTCCAAAACGTTGCAGCAGCTGCAACAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTTAAGGCTGAGAAGCTTGATAAGATCTAA 522 0.4502 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTENEPVVAAANVDIPVIPEEPKTVSVQPLFGSGSEGSGEAKPKDGPKRCSSCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01659 173 MobiDBLite consensus disorder prediction 90 114 - -
Pumo11g01659 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pumo11g01659 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Pumo11g01659 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pumo11g01659 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Pumo11g01659 173 Gene3D - 4 70 - -
Pumo11g01659 173 Gene3D - 97 169 IPR035896 -
Pumo11g01659 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Pumo11g01659 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Pumo11g01659 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Pumo11g01659 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 173 - -
Pumo11g01659 173 FunFam Zinc finger AN1-type containing 6 89 169 - -
Pumo11g01659 173 SUPERFAMILY AN1-like Zinc finger 102 168 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01659 Pumo-Chr11 47942115 47944813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01659 8 173 C2H2 Transcription Factor Family AT3G52800 42.857 2.36e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01659 - - gmx:100500070 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01659 11 47942115 47944813 Pumo11g01659 11 47942115 47944813 ECH