Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01648 ATGGAGATCATGTCAACTTTGGAGAGAGGCCTAAATGACACGAGGGAGTATTATGAGAGTGGAAAGACTAAGGAAGAGTCTTGGAGAGAATCGCAGCTCAAAGGGTTGCGTCGGTTCCTCATGGAACAACAAGAAGATATCATGAGGGCCCTCATGCAAGATTTAGGGAAACATCAACTTGAAGCTTTTAGAGACGAGATAGGAACGTTGATCAAGACCTTAAATCTGGCATTGAAGTCTTTGAAAGATTGGATGTCAGGCAAAAAGGCTGCGTTGCCACAAATAGCATTGCTCACTAGTGCAGAAATTGTTCCGGAGCCACTTGGTCTGGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGACTATCCTTGGAGCCACTGATAGGAGCAATAGCTGCGGGAAACGCAGCAGTCTTAAAGCCTTCAGAGTTGTCTCCTGCATGTTCTTCTCTAATTGCTTGTAGTCTCCCCACTTATTTGGACACTAAAGCCATTAAGGTGATCCAAGGAGGGCCACAAGAGACCCAGCAACTACTAGAGCAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGCGGATTGTGATGTCTGCTGCTGTAAAGCATCTAACTCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGACTCCCTTTCATCTTCTTGGGACATAGAGGTCACTGTGAAGAGAATAATTGTGGGGAAATACGGGACTTGTGCTGGTCAAGCATGCATAGCAATTGATTATGTCATAGTGGAAAAGGGGTACTGTTCAAAACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCAGAAAAATCCAAAACCATTGCAAGGATAGTTAATAAACACCACTTCTCTAGATTGAAGAATCTTCTTCTTGCTGATAAAATGGTCGAAGAATCTGTGGTTTATGGTGGTTCAATGGACGAAGAAATCTTATTTATTGAGCCAACGATCTTGGTGGATCCCCCACTGGACGCAGCAATTATGTCGGAAGAGATTTTTGGCCCATTGCTTCCGATTATTACTGTGGAGAAGATTGAGGACAGTATTAAATTCTTAAGTTCTAGACCTAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACAAAACACTGCAGAGAAGAATGATATCTGAAACATCATCTGGGAGTGTGACTTTCAACGATGCAATTCTACAATATGCTGCTGATAGTCTCCCATTTGGAGGAGTGGGAGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTTAGCCACCAGAAGGCAATTGTAAGAAGAAGTTTCCTCACTGATTTTTGGTACAGATATCCTCCATGGACACTAAACAAGTTGCAACTTCTTGAAGTCTCTTACAACTATGATTATCTGGGATTGCTCCTTGTCCTGTTGGGTTTAAAGAGACCATCAAAACGCATGATCACAGATCATATTTAG 1485 0.4283 MEIMSTLERGLNDTREYYESGKTKEESWRESQLKGLRRFLMEQQEDIMRALMQDLGKHQLEAFRDEIGTLIKTLNLALKSLKDWMSGKKAALPQIALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNAAVLKPSELSPACSSLIACSLPTYLDTKAIKVIQGGPQETQQLLEQRWDKIFFTGSARVGRIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSWDIEVTVKRIIVGKYGTCAGQACIAIDYVIVEKGYCSKLVELMKVWIKKMFGENPEKSKTIARIVNKHHFSRLKNLLLADKMVEESVVYGGSMDEEILFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEDSIKFLSSRPKPLALYVFTKNKTLQRRMISETSSGSVTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTLNKLQLLEVSYNYDYLGLLLVLLGLKRPSKRMITDHI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01648 494 Pfam Aldehyde dehydrogenase family 27 440 IPR015590 GO:0016491
Pumo11g01648 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 420 IPR016163 GO:0016620
Pumo11g01648 494 FunFam Aldehyde dehydrogenase 216 420 - -
Pumo11g01648 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 438 IPR016162 GO:0016491
Pumo11g01648 494 PANTHER ALDEHYDE DEHYDROGENASE 4 475 IPR012394 GO:0006081
Pumo11g01648 494 Coils Coil 41 61 - -
Pumo11g01648 494 PIRSF ALDH 1 476 IPR012394 GO:0006081
Pumo11g01648 494 FunFam Aldehyde dehydrogenase 15 219 - -
Pumo11g01648 494 SUPERFAMILY ALDH-like 14 457 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01648 Pumo-Chr11 47773661 47777178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01648 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 53.814 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01648 K00128 - gmx:100784210 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04027 4 80965512 80968287 Pumo11g01648 11 47773661 47777178 PCT