Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01638 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGCCTTCCCACATCAAATCAAACCTTCACAACTTGTCTGATCATGATGATGATGGGAAGAGGAATGAGAAGGATCCTTGGGGAGGGTTCAGTGAGTACAGTTTGGATCAGTTAAGAGTTGCAACCTCAGGATTTTCACCAGACAACATTGTCTCAGAACACGGTGAGAAGGCTCCAAATGTTGTCTACAGAGGTATGCTTGAGGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGTTCGTGCTGATTCTGCTTTTTGCTTTTTTGCTTTTCCTTGCATGTGTGTGGTTTCTAAGTGGAATTTTATGTTTGATTTTGGTGTCTGGTTTGGTTGGACTGTTCAGGAGGACGCACGTGCTGTGGGGCAGCTAAGGAATGAAAGATTGGCTAACTTGGTTGGGTGTTGCTGTGAGGGAGAAGAGAGGTTGCTTGTGGCAGAGTTCATGCCCAATGAAACTCTCTCCAAACATCTTTTTCATTGGGAGGCCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAAGGAAGGGCATTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGCAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACTCCTCCAGAGTACTTGAGGACAGGAAGGATCACCCCTGAAAGTGTAGTTTACAGTTTTGGCACCCTATTGCTTGATCTTCTGAGTGGAAAGCATATCCCACCCAGTCATGCACTTGATCTTATACGAGGCAAAAATTTTCTGTTGCTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATATGAACCTCGTGAGAGACCAAATGTTAAGTCGCTTGTGACTGCTCTAACCCCTCTTCAGAAAGAAACTTCGGTACCATCATATGTTTTAATGGGCATACCGGATAAGAGTCTGTCATCACAGGAAACAGTTTCATTGACGCCTTTTGGTGATGCTTGTTCAAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTAGGCTACAAGGATGATGAAGATGTTGCAAATGAGTTGTCCTTTCAAATGTGGACAAATCAAATACAAGAAACTCTAAATTCTAAGAAGCAAGGCGATTCTGCTTTTCATGCTAGAGACTTCTCCACGGCCATTGACTGCTATACACAATTCATCGATGGTGGAACCATGGTATCACCAACCATGTACGCCAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATCTCCCACTTGGCCCACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAACACTGGAAACCAGGAAGTATAGAAATTGA 1587 0.4373 MGARCSKFSLCWWPSHIKSNLHNLSDHDDDGKRNEKDPWGGFSEYSLDQLRVATSGFSPDNIVSEHGEKAPNVVYRGMLEDDRLVAVKRFNKSAWPDSRQFLVRADSAFCFFAFPCMCVVSKWNFMFDFGVWFGWTVQEDARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALTPLQKETSVPSYVLMGIPDKSLSSQETVSLTPFGDACSRRDLTAIHEILEKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFHARDFSTAIDCYTQFIDGGTMVSPTMYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01638 528 Gene3D Phosphorylase Kinase; domain 1 31 110 - -
Pumo11g01638 528 Gene3D Phosphorylase Kinase; domain 1 133 171 - -
Pumo11g01638 528 ProSiteProfiles Protein kinase domain profile. 60 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01638 528 FunFam probable serine/threonine-protein kinase At4g35230 421 528 - -
Pumo11g01638 528 SUPERFAMILY Protein kinase-like (PK-like) 39 354 IPR011009 -
Pumo11g01638 528 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 139 527 IPR045845 GO:0004672|GO:0009742
Pumo11g01638 528 Pfam Protein tyrosine and serine/threonine kinase 138 347 IPR001245 GO:0004672|GO:0006468
Pumo11g01638 528 Gene3D Transferase(Phosphotransferase) domain 1 173 364 - -
Pumo11g01638 528 SUPERFAMILY TPR-like 425 524 IPR011990 GO:0005515
Pumo11g01638 528 FunFam probable serine/threonine-protein kinase At5g41260 173 364 - -
Pumo11g01638 528 Gene3D Tetratricopeptide repeat domain 421 527 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01638 Pumo-Chr11 47706641 47711212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01638 45 376 Glycoside Hydrolase AT3G07070 30.220 2.15e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pumo11g01638 PK_Tyr_Ser-Thr 2.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01638 - - gmx:732542 952.199