Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01627 ATGGAACACGAGAAAGCGCCTATCTTGCTGGAAGAACGTACAATGCAGGAAATTGAGATACCCATTGTCTCTGAAAGACTTGATGTTCTTCCTATAAAGGCAGACTCATCTTGCAGTTCTGTTTGTCCTTTTTCTGGACATGAAAACAGTGTTGTGGCATCAAAAGAGTCATCAAAGTCAGCAAAGAAACTCTCTGTACTCATTGTTTTCTATGCTATTGTTATGGTTGTGGAACTTATTGGTGGAATAAAAGCTCACAGCCTAGCTGTCATCAGTGATGCAGCACACTTGCTTTCTGATATTGCTGGATTCTCTATCTCTCTATTTGCAGTGTGGGCTTCAGGTTGGGAGGCAACACCGCATCAATCTTTCGGATACAATCGTCTTGAGGTTTTGGGGGCTCTTGTGTCTGTGCAGTTAATTTGGTTGATATCTGGTTTTTTGATATATGAAGCTGTTGGTAGAATTCTTGTTCACAATGCCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAGCACTTGGGTTTGTTCTTAACTTCATCATGGTTGCATGGATTGGTCATGATCATAGTCATCATCATCATCATCATCATTATGGTTGTGAAAACCCAGGTCATGATCATAGTCATCATCAATGCCAGACAGATCATGATCATGGGAAGGAGGATCAATCTATTATAACTGATGAGGAGAATGTTAACCTGGTCTCAAGTAGTCAGAGAAATACTAATGTCTTGAACATAAATCTGCAGGGGGCGTATTTGCATGTCATGGCTGATATGATTCAATCTATCGGAGTGATGGTTGCTGGAGCCATAATATGGGCAAAACCTAAGTGGTTTGTAGTTGACCTTGTGTGTACTCTTGTATTTTCTGTTTTGTCTTTAAGTACCACCCTGCCCATGCTTAGGAATATTTATGGAATACTGATGGAGAGGACACCAACTGAGATCAATATTAGTAAGCTGGAAAATGGCCTCAGAAATATGAAGGGAGTGCAGGATGTTCATGATTTGCACGTTTGGGCTATAACTGTTGGAAAATTTGTTCTATCTTGCCACGTAGTGGCTGAGCCTGGCATAAGTCCCATTGACTTACTAGGCAGGATTAAACATTTCTGTGAAAATAAGTATCAAATACAACATGTAACCATACAAATTGAGTAA 1167 0.4027 MEHEKAPILLEERTMQEIEIPIVSERLDVLPIKADSSCSSVCPFSGHENSVVASKESSKSAKKLSVLIVFYAIVMVVELIGGIKAHSLAVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALVSVQLIWLISGFLIYEAVGRILVHNASVNGKLMLAIAALGFVLNFIMVAWIGHDHSHHHHHHHYGCENPGHDHSHHQCQTDHDHGKEDQSIITDEENVNLVSSSQRNTNVLNINLQGAYLHVMADMIQSIGVMVAGAIIWAKPKWFVVDLVCTLVFSVLSLSTTLPMLRNIYGILMERTPTEINISKLENGLRNMKGVQDVHDLHVWAITVGKFVLSCHVVAEPGISPIDLLGRIKHFCENKYQIQHVTIQIE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01627 388 Pfam Cation efflux family 66 311 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pumo11g01627 388 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 312 IPR027469 -
Pumo11g01627 388 MobiDBLite consensus disorder prediction 196 222 - -
Pumo11g01627 388 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 42 388 - -
Pumo11g01627 388 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 317 388 IPR036837 -
Pumo11g01627 388 Gene3D Cation efflux protein transmembrane domain 60 310 IPR027469 -
Pumo11g01627 388 MobiDBLite consensus disorder prediction 200 222 - -
Pumo11g01627 388 NCBIfam cation diffusion facilitator family transporter 62 388 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01627 Pumo-Chr11 47610989 47613058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01627 1 388 Inorganic Solute Cotransporters AT2G29410 49.616 7.37e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01627 K14689 - gmx:100777590 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01627 11 47610989 47613058 Pumo11g01627 11 47610989 47613058 ECH