Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01626 ATGACAGATACTGGTATCTCACTTTACTATGAAATGTCTGATGATTCTCTCAAGAACTTAAAGGGAGAACGCAATGGAAATGAGTACCTCATCAACCTTATTGACTCTCCTGGGCACGTGGACTTCTCTTCTGAGGTTACAGCTGCTCTGCGCATTACTGATGGGGCCCTTGTGGTGGTAGATTGTGTGGAGGGCGTCTGCGTGCAAACTGAAACAGTTCTCCGTCAGGCTCTTGGTGAAAGGATCCGGCCTGTTTTGACTGTCAATAAGATGGACAGGTGTTTCCTTGAGCTTCAGGTGGATGGAGAAGAAGCTTACCAGACCTTTCAAAGGGTTATTGAGAATGCTAATGTGATTATGGCTACATATGATGTTCAGGTCTACCCAGAAAAAGGAACTGTTGCTTTTTCTGCTGGTCTGCATGGCTGGGCTTTCACTCTGACCAACTTTGCTAAAATGTATGCCTCAAAGTTTGGAGTTGATGAGGCAAAGATGATGGAAAGGCTCTGGGGTGAGAATTTCTTTGATCCAGCCACCAAGAAATGGACCAACAAGAATACTACATGCAAGCGTGGTTTTGTTATGAGCCTATCAAACAGATAA 603 0.4461 MTDTGISLYYEMSDDSLKNLKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTNKNTTCKRGFVMSLSNR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01626 200 FunFam Translation elongation factor 2 1 162 - -
Pumo11g01626 200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 188 IPR027417 -
Pumo11g01626 200 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 3 194 - -
Pumo11g01626 200 Gene3D - 1 162 IPR027417 -
Pumo11g01626 200 Pfam Elongation factor Tu GTP binding domain 18 146 IPR000795 GO:0003924|GO:0005525
Pumo11g01626 200 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 178 IPR000795 GO:0003924|GO:0005525
Pumo11g01626 200 PRINTS GTP-binding elongation factor signature 32 42 IPR000795 GO:0003924|GO:0005525
Pumo11g01626 200 PRINTS GTP-binding elongation factor signature 48 59 IPR000795 GO:0003924|GO:0005525
Pumo11g01626 200 PRINTS GTP-binding elongation factor signature 84 93 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01626 Pumo-Chr11 47606827 47608342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01626 1 194 Eukaryotic Initiation Factors Gene Family AT1G56070 87.192 1.39e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01626 K03234 - sind:105166103 357.451