Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01625 ATGAATGATCAGAAGGATAAGCTGTGGCCTATGTTGCAAAAACTTGGAGTCACCATGAAATCTGAAGAGAAAGACCTGATGGGTAAAGCTCTAATGAAACGTGTCATGCAGACCTGGCTCCCAGCAAGTACTGCACTTCTGGAAATGATGATATTCCATCTTCCCTCCCCTTCAAAGGCCCAAAAGTATCGTGTAGAGAACTTGTATGAGGGTCCCCTTGACGATCAATATGCAAATGCTATTAGGAATTGTGATCCTGATGGACCTTTAATGCTTTATGTATCAAAGATGATTCCTGCATCTGATAAGGGCAGGTTTTTTGCTTTTGGTCGTGTTTTCTCTGGTAGGGTCTCAACTGGTTTGAAGGTCAGAATTATGGGTCCAAATTACATCCCTGGAGAGAAGAAAGACTTGTATGTCAAGAGTGTGCAAAGGACTGTAATTTGGATGGGGAAAAGGCAAGAAACTGTGGAGGACGTGCCTTTGCCATGGTTGGGTTGGACCAATATATCACCAAGAATGCAACATTAA 531 0.4275 MNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASTALLEMMIFHLPSPSKAQKYRVENLYEGPLDDQYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYIPGEKKDLYVKSVQRTVIWMGKRQETVEDVPLPWLGWTNISPRMQH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01625 176 Gene3D Yeast translation eEF2 (G' domain) 1 40 - -
Pumo11g01625 176 SUPERFAMILY Translation proteins 57 161 IPR009000 -
Pumo11g01625 176 CDD EF2_II 89 161 - -
Pumo11g01625 176 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 161 - -
Pumo11g01625 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 55 IPR027417 -
Pumo11g01625 176 Gene3D Translation factors 57 163 - -
Pumo11g01625 176 FunFam Translation elongation factor 2 57 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01625 Pumo-Chr11 47606285 47606815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01625 1 162 Eukaryotic Initiation Factors Gene Family AT1G56070 90.741 2.22e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01625 K03234 - aew:130751738 325.094