Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01596 ATGTTTTATAGTGTCCACCGTTCGTTCTCATTTGTGGACTTCATTGGTTTGGTTTGGTTGGTTCTGATAATGAAGTGCTTCTATTTCTCAAATGGAGGAGAAGACGAGGATTCCGTGGCCGCGGCGCCGAGTTCGCGCGGCTCCACCTCGCGCGTGTCGTGGGCGCGTTCGCTGAGCCTGATGGACACGCGCAGCCGCTCCCACTTTGACTCCGAGTCAACGGAGTTCTCCGACACGGTGGACTTCCACCACTTCCTGGCGCAGCGCCGCGCCAACGACCTACGCATCTTCTCCTTCTCCGACCTCAAATCCGCCACGCGCGGCTTCAGCCGCGCCCTCCTGGTCGGCGAGGGCGGCTTCGGCTCCGTCTACCGCGGCCTCCTCCTCGACGAAAACGACGCCGCCGTCGCGATCAAACAGCTCAACCGTAACGGCCACCAAGGGCACAAGGAGTGGATCAACGAGGTAAACTTATTGGGCGTTGTGAAGCACCCTAATTTGGTGAAGTTAGTTGGGTACTGTGCTGAAGACGATGAAAGAGGGATTCAGAGGCTTTTGGTTTACGAGTTTATGCCGAATAAGAGTTTGGAGGATCATCTCTTGGCGCGAGTGCCATCCACGATTCTGCCTTGGGGGACCAGGTTGAGGATTGCGCAAGATGCGGCGAGGGGTTTGGCGTATCTTCATGAGGAAATGGATTTTCAGGTACTGTTTGTGATGGATTGTGACCTTGCCTTGTCGTGTATTAATCAGGTTAATTCTTAG 765 0.5503 MFYSVHRSFSFVDFIGLVWLVLIMKCFYFSNGGEDEDSVAAAPSSRGSTSRVSWARSLSLMDTRSRSHFDSESTEFSDTVDFHHFLAQRRANDLRIFSFSDLKSATRGFSRALLVGEGGFGSVYRGLLLDENDAAVAIKQLNRNGHQGHKEWINEVNLLGVVKHPNLVKLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPSTILPWGTRLRIAQDAARGLAYLHEEMDFQVLFVMDCDLALSCINQVNS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01596 254 PANTHER OS01G0588500 PROTEIN-RELATED 71 237 - -
Pumo11g01596 254 SUPERFAMILY Protein kinase-like (PK-like) 92 232 IPR011009 -
Pumo11g01596 254 ProSiteProfiles Protein kinase domain profile. 109 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01596 254 Pfam Protein tyrosine and serine/threonine kinase 115 231 IPR001245 GO:0004672|GO:0006468
Pumo11g01596 254 FunFam Serine/threonine-protein kinase BIK1 77 190 - -
Pumo11g01596 254 Gene3D Phosphorylase Kinase; domain 1 83 190 - -
Pumo11g01596 254 ProSitePatterns Protein kinases ATP-binding region signature. 115 139 IPR017441 GO:0005524
Pumo11g01596 254 Gene3D Transferase(Phosphotransferase) domain 1 191 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01596 Pumo-Chr11 47254537 47255301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01596 95 238 Glycoside Hydrolase AT3G07070 51.724 4.95e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo11g01596 PK_Tyr_Ser-Thr 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01596 - - gmx:100811825 390.963