Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01594 ATGACTAAAGTCTATGTTGGTGAAGGTCATCTGAGTGCTAAGAGTGATGTCTTCAGTTTTGGAGTTGTCCTGCTGGAAATGTTATCTGGCAGGAGGGCAGTGGACAAGAATAGACCATCAGGACAACACAATTTGGTGGAATGGGCCAAACCATACTTAGCCAACAAACGCAAACTTTTGCGTGTGTTGGATAATCGTCTTGAAGGCCAATATGCAGTAGATGAGGCCTATAAGGTAGCTACCCTCTCTCTGCGATGCCTTGAAACAGAATCCAAGTTGAGACCAACCATGGACGAGGTTGTCACAGATTTGGAGCAGCTTCAGGTTCCACATGTGAATCAAAATCGTTCTGTGAATGCCTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTTACCCATGGTAGAATCGCCACAGCTTCAGTTTCCCCGCTCTCACATGACATTGCAAATACACGTCCTTGA 462 0.4545 MTKVYVGEGHLSAKSDVFSFGVVLLEMLSGRRAVDKNRPSGQHNLVEWAKPYLANKRKLLRVLDNRLEGQYAVDEAYKVATLSLRCLETESKLRPTMDEVVTDLEQLQVPHVNQNRSVNASRGRRKSADDFTHGRIATASVSPLSHDIANTRP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01594 153 Gene3D Transferase(Phosphotransferase) domain 1 2 130 - -
Pumo11g01594 153 MobiDBLite consensus disorder prediction 114 136 - -
Pumo11g01594 153 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01594 153 Pfam Protein tyrosine and serine/threonine kinase 8 104 IPR001245 GO:0004672|GO:0006468
Pumo11g01594 153 PANTHER OS01G0588500 PROTEIN-RELATED 5 108 - -
Pumo11g01594 153 SUPERFAMILY Protein kinase-like (PK-like) 6 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01594 Pumo-Chr11 47249442 47249903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01594 5 131 Receptor kinase-like Gene Family AT4G02010 44.275 1.44e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo11g01594 PK_Tyr_Ser-Thr 4.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01594 - - gmx:100809679 274.633