Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01589 ATGGCCATGGATGAAGAACATCAATGTGATGAGAAGGTCCACGTGGCAGTTGGGAAGTCCCTCAAGAAAGCCGTCACTTTGCTTCAATGGTGTTTCACCCATTTCAGCAAAGCACAGATTTGCTTACTTCATATTTACCAACCTTCTACTATGATCCCCACACTGTTGGGAAAATTGCCAGCATCCCAAGCTAGTCCTGAAGTGGTGTCGGCTTACAGAATAGAGGAAAGAGAAGAGACCAAGAGGCTTCTGGAGAAGTATTTGAGCCGTTGCCGTGCTGCTAAGGTTAAGGCAAGTAGTGTCATTGGTGAAGGTGATCAAGTCCAGAAAGGGATTGTTGATTTGGTTACTGTGCATAATGTCAGGAAGCTTGTTATTGGATCCATACCAGAAAATTGCATGAAAATCAAAAGGAATTCCAGCAAAGCAAATTATGCTGCTAAAAATGCTCCCCCATTCTGTGAAATATGGTTTGTCTATAATGGTAAGCACATTTGGACAAGAGAAGCTTCTGAAACTCCTCGTTCTTTGTCTTCACATGCCCAACCTGAGACTACAACTGCAGAGAGCTTGAGTTGTAGATCTTTTCATGATGGTACAAATGAATTTTTCCATTCAGAATGTCTTCAATTAAATTCTACAAGGACTACAAGAAGTATGGTTCAGAGTGAAATCATTGAAGCAGAAGCTGCTTTTTCATCCAAATCATCCAGTTGGAATAGTCATTGTTCTCCCCAACATTCGGCTGGTTGGTATTTAGATACTCAATCAGAGTTTAAGGAAGAAACAATTGATAGTCAACTTATTGAAGCCGAAAGAGAAGCTAATGCTGCAACAGACCAGGCCCTTGCAGAGCTGTTGAAGAGCAAAAGGTTGGAAGTCAAAGCCATTGAGGCCATTAGTAAGGTCAACTTTTTTGAATCTGCCCATGCACATGAAGTAAAGCTCAGAAAAGAGGCTGAGGATGCACTGAGAGCTAAAATACAGGAGCAACAGATGTTCTTTGATGAGAAAGAAGAAATTGCTAGTGAGTTGGAAAGGACTGCGAGAAGTATTTCCCTTCTAGGCAGTTGTGCACATGATACCAACCATAAGCGAGATGAAGCTGCAAATGAACTATCACTAATTCAAGCATCCATCTCAAACCTGCGGCATGAAAAGCAGCAAATCAGGCGACAGAAAATGGAAGCACTACACTGGCTTGAGCGGTGGAAAAGTTGTGGACAAGTTGGAGCAGATCACTGCAATGGAGTCATTGGGTTTGCTGAAGAATTCCCTGAGCTTGCCGAATTTTCATTATCAGATCTTCAAAATGCCACATGCAATTTTTCTGAGAGTTTCAAAGTTATGGAGGGTGGATATGGTTCTATTTATAAGGGGGAAATGTTGGGTAGAACAGTTGCTATAAGGAAGCTCCATCCACACAACATGCAAGGATCAACAGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTCCAACACCCTCATCTGGTTACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCATTTGTATATGAGTACTTGCCTAGTGGAAGTCTCCAAGACTATCTATTCCGAAAAAGCAGTCTTCTCCCTTTGACTTGGAACATCCGAACACGATGGATTGCCGAAATTGCTACAGTTCTCTGCTTCTTACATTCTTCCAAACCTGAAACTATTATCCATGGTGGTCTGACTCTTGAAACTGTCCTTCTTGACTCTGCGCTTAGTTGCAAGATATGTGAATTTGGGTTCAGCAGGCTGGTGAAAGAGGAGTCACTTTATCCTCCTAGTTTCCACTTCAGCACTGAGCCAAAGGGTTCTTTTACATATACAGATCCTGAGTTTCAGAGAACTGGAGTGCTAACACCTAAATCTGACATATACTCTTTTGGGCTCATCATTTTACAACTCCTCACTGGTAGGACTCCAGTTGGATTAGCTGGTGAAGTACGCAGAGCAGTTTCATGTGGAAAATTGTCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCATTCAACCGTGGCAACACGATTGGCTGAACTGGGACTGCAATGCTGCCAACTGAACAGTAGAGGCAGACCAGAGTTAACACCTTCTCTAGTGAGAGATTTGGAGCACTTGCATGTTTTAGAAGAGCGACCTGTGCCACCTTTTTTCTTGTGTCCAATCTTTCAGGAAATAATGCATGATCCTCAAGTTGCAGCAGATGGATTTACTTATGAAGGGAAGGCCATAAGGGAATGGCTGGAAAATGGGCACGAAACTTCTCCTATGACTAATTTAAAATTGAGTCACCTGCATCTCACTCCCAATCATGCACTTCGACTTGCTATCCAAGGCTGGCTTTGCAAATCTTGA 2364 0.4264 MAMDEEHQCDEKVHVAVGKSLKKAVTLLQWCFTHFSKAQICLLHIYQPSTMIPTLLGKLPASQASPEVVSAYRIEEREETKRLLEKYLSRCRAAKVKASSVIGEGDQVQKGIVDLVTVHNVRKLVIGSIPENCMKIKRNSSKANYAAKNAPPFCEIWFVYNGKHIWTREASETPRSLSSHAQPETTTAESLSCRSFHDGTNEFFHSECLQLNSTRTTRSMVQSEIIEAEAAFSSKSSSWNSHCSPQHSAGWYLDTQSEFKEETIDSQLIEAEREANAATDQALAELLKSKRLEVKAIEAISKVNFFESAHAHEVKLRKEAEDALRAKIQEQQMFFDEKEEIASELERTARSISLLGSCAHDTNHKRDEAANELSLIQASISNLRHEKQQIRRQKMEALHWLERWKSCGQVGADHCNGVIGFAEEFPELAEFSLSDLQNATCNFSESFKVMEGGYGSIYKGEMLGRTVAIRKLHPHNMQGSTEFHQEVQVLGSLQHPHLVTLLGVCPEAWSFVYEYLPSGSLQDYLFRKSSLLPLTWNIRTRWIAEIATVLCFLHSSKPETIIHGGLTLETVLLDSALSCKICEFGFSRLVKEESLYPPSFHFSTEPKGSFTYTDPEFQRTGVLTPKSDIYSFGLIILQLLTGRTPVGLAGEVRRAVSCGKLSSILDSSAGEWHSTVATRLAELGLQCCQLNSRGRPELTPSLVRDLEHLHVLEERPVPPFFLCPIFQEIMHDPQVAADGFTYEGKAIREWLENGHETSPMTNLKLSHLHLTPNHALRLAIQGWLCKS 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01589 787 Coils Coil 366 393 - -
Pumo11g01589 787 MobiDBLite consensus disorder prediction 172 192 - -
Pumo11g01589 787 SUPERFAMILY Protein kinase-like (PK-like) 427 716 IPR011009 -
Pumo11g01589 787 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 716 787 IPR013083 -
Pumo11g01589 787 CDD RING-Ubox_WDSUB1-like 718 773 - -
Pumo11g01589 787 CDD STK_N 12 162 - -
Pumo11g01589 787 SMART Ubox_2 720 783 IPR003613 GO:0004842|GO:0016567
Pumo11g01589 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 145 - -
Pumo11g01589 787 Gene3D Phosphorylase Kinase; domain 1 420 515 - -
Pumo11g01589 787 ProSiteProfiles Protein kinase domain profile. 443 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01589 787 SUPERFAMILY RING/U-box 714 786 - -
Pumo11g01589 787 ProSiteProfiles U-box domain profile. 716 787 IPR003613 GO:0004842|GO:0016567
Pumo11g01589 787 Pfam Protein tyrosine and serine/threonine kinase 449 699 IPR001245 GO:0004672|GO:0006468
Pumo11g01589 787 Coils Coil 261 281 - -
Pumo11g01589 787 Gene3D Transferase(Phosphotransferase) domain 1 516 715 - -
Pumo11g01589 787 PANTHER OS02G0152300 PROTEIN 13 781 - -
Pumo11g01589 787 Gene3D HUPs 8 151 IPR014729 -
Pumo11g01589 787 Pfam U-box domain 717 786 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01589 Pumo-Chr11 47196259 47201698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01589 3 784 U-box Gene Family AT2G45910 36.074 5.17e-165 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pumo11g01589 PK_Tyr_Ser-Thr 8.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01589 - - gmx:100799032 1424.84