Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01583 ATGGAGAGTGGGAATGATGAGGAGTTGGAAATGGGAGGGAGTAATAGTAATAATAGTAATGGCGGGGTTGGGGTTGGGGTTGGAGGGAGTTCGCGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAACCTGTATAAGCAGGGAATAAAGACTCCGAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCCAGGCAGAGACAGAAGCAGAAGCAAGAATCAATCGCTTACTACAATCGCTTTCTTCATATGCCTCACCCATTTTTTTCTCCGCCTATTTGCCCAAATGCCATATGTGCCCCATATTGCATACCTCAGGCACAGAGTGAAATTGGGTATTATCCCCCACATCCAAAGGTGCTTGTACCCGTAGGATTTAGGATGAGTTCATCTGAGAAAGTTGTGCCCACAGCCACAGGCACGATGAATAATGGCCCGCTGGTATACGAAGGCATGCAGCAAATGCAGCAGCAGAGAATCTCGGATGGTAACTTGAGCTACAGTAACCAAGAAACGTTGGATCTTTTTCCTCTGCACCCAACTGGCATTTTGGAAGGGAAAACAACAACAGACCAGGTGTCTTGTCTGGCTTCAGTTTCTGCTGATAGTTCCACTGATACACCTTCTGCTGCGGCTTCTCCTGATATCAATGAAGATTATGATGCTCATGCTTCCCCACTAAACCAACCCTTCTTTGATTTTTTTAGTACTTCTGGACATGGTTCTTAA 795 0.4579 MESGNDEELEMGGSNSNNSNGGVGVGVGGSSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQESIAYYNRFLHMPHPFFSPPICPNAICAPYCIPQAQSEIGYYPPHPKVLVPVGFRMSSSEKVVPTATGTMNNGPLVYEGMQQMQQQRISDGNLSYSNQETLDLFPLHPTGILEGKTTTDQVSCLASVSADSSTDTPSAAASPDINEDYDAHASPLNQPFFDFFSTSGHGS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01583 264 MobiDBLite consensus disorder prediction 1 31 - -
Pumo11g01583 264 Gene3D - 30 98 - -
Pumo11g01583 264 MobiDBLite consensus disorder prediction 221 245 - -
Pumo11g01583 264 MobiDBLite consensus disorder prediction 9 25 - -
Pumo11g01583 264 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Pumo11g01583 264 FunFam WUSCHEL-related homeobox 4 30 97 - -
Pumo11g01583 264 SUPERFAMILY Homeodomain-like 30 99 IPR009057 -
Pumo11g01583 264 SMART HOX_1 28 95 IPR001356 GO:0003677
Pumo11g01583 264 Pfam Homeodomain 31 90 IPR001356 GO:0003677
Pumo11g01583 264 CDD homeodomain 32 92 IPR001356 GO:0003677
Pumo11g01583 264 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 229 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01583 Pumo-Chr11 47106337 47107965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01583 23 258 Wox Gene Family AT5G59340 42.802 1.78e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo11g01583 Homeodomain 5.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01583 - - gmx:100817714 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01583 11 47106337 47107965 Pumo11g01583 11 47106337 47107965 ECH