Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01582 ATGCCGCGGTTGCGGCGGACCCGGCGGCTGCGGTGGACCTCGGCGGCTTCCACCACCGATGCTGTCGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGTTCGTTCTCAAGGTGTTGAAGGATGGTCTTTCTGCCGTCCATGTGCCTTATGCATATGGATTTGCTATCATATTGCTCACTGTTGTAGTTAAGGCCTTGACGCTTCCCTTGACAAAGCAACAGGTTGAATCTACACTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGATAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACGTCAAGGCTATATCGGCAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTTTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTGCTAACGGAAGGTTTCCTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCATTTGTGGACGGGCATCCACCTTTGGGTTGGCAAGATACTGCAGCGTATCTTGTTTTACCTATTCTTCTTATCGTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGACAGATCCTTCTCAAAAGAATCAACTTCTTATTTTAAAGTTTCTTCCACTCATGATCGGCTACTTCTCACTATCTGTCCCATCAGGACTAACAATTTACTGGTTCGTAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGAGGTGCAAAGCCTGTTGTGAGTGAAAATGCTAGTGGGATTATTACTGCAGGACGTGCTAAAAGATCAGATTTGCAGCCAACAAAGGGCGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGAAAAGAAGAAAAAGTTAAGCAAGGCACTGCCAGTGGAAGAAGTTCAGCCACTGGCTTCTGTTTCTGCTTCTGATGATGGCTCGGATACAGAAAGTGACAATAAGGGACAGGAAGATGCAGAAGAAGCATATGCTTCTAAAGTTGGCGAAGAGGTTCAAAATTATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1146 0.4538 MPRLRRTRRLRWTSAASTTDAVVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVVVKALTLPLTKQQVESTLAMQNLQPKIKAIQDRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLIVSQYVSMEIMKPPQTDPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFVNNVLSTAQQVWLRKLGGAKPVVSENASGIITAGRAKRSDLQPTKGGERFKQLKEEEKKKKLSKALPVEEVQPLASVSASDDGSDTESDNKGQEDAEEAYASKVGEEVQNYSRERRSKRSKRKRAV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01582 381 MobiDBLite consensus disorder prediction 339 369 - -
Pumo11g01582 381 PANTHER OXA1 15 315 IPR001708 GO:0016020|GO:0032977
Pumo11g01582 381 Pfam 60Kd inner membrane protein 57 270 IPR028055 -
Pumo11g01582 381 MobiDBLite consensus disorder prediction 310 381 - -
Pumo11g01582 381 NCBIfam membrane protein insertase YidC 57 269 IPR028055 -
Pumo11g01582 381 CDD 5TM_YidC_Alb3 58 270 IPR047196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01582 Pumo-Chr11 47074399 47080890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01582 14 326 Chloroplast and Mitochondria Gene Families AT2G28800 72.930 5.01e-163 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01582 K03217 - gmx:100813782 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01582 11 47074399 47080890 Pumo11g01582 11 47074399 47080890 ECH