Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01566 ATGTCTTTGCAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACAGTAATGACAGAGAGACAGTATTCGATAATCCTTCCAAAATTGAACCAAAACGACCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCTGTAGAAGATGCAGATGAAAAATCTAGTCCAGGATTTTCAAATGTAAATATTCCTCCCTGGGAGAACAATCCCAATTTTCATTCAGTCCCAAACCAATTTATTGGCCGGTTATTTGGGTCTGAAACCAGGCCTGTCAATTTCACTGAAAAGAATACTTCTTATGTTTTGGCTGATGATTCTAATGTGAGATCAAAGATGATCACCAATCAATATGGAGATGATGCATCTTTTGGTTTGTCTATATCTCATTCCATTGAAGATTCTGAAGCATGTGTAAATTTTGGTGGAATAAAAAAAGTCAAAGTAAATCAGGTTAAGGAAGATGATGTACAGGCTCTGGAGGGACATAATTTTAGTAGGCAGAGTAATGGTGACCTACATCAGGCCTATAACAGGGAAGTTGAGACAAGGTCTGCATCAATAGGGCAAGCCTTTGACAAGGATGGTGATGCCACTTTAATGGGACTCACCTACGGCAGAGGGGAAGCACATGTCAGATCATTTAGTGCCCCCTTTGTCAAAGGAGATGACTCAATTGTATCAATTAGTGAATCCTATAATAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAAAGGGATATTATCTCTGTGGGTAGGCCTGCTGCAGAGTATGATCAATTATATAATCAATCTTCAGTTCATGTGTCAACAACAGCCCATGAGAAAGAGTTGGATGTGTCAAGTTCTGATGCAGTTGCAAGTACTCTTCAGGTAGCAAAAGTAAAGTCTGAAACTGTGTCCAAGAATAAACAAGAGCTCAAAACAGCAAAGAAAGAAGCTCCGAACAGCTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATTCTTGATGGTGTTCCTGTAAAGTATATCTCGGTGGCACGGGAGGAACTTCGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCAGTCATGTAACTATACAAAGGTTCTGAATGCTTACGAGTTTGAGAGACATGCTGGCTGCAAAACAAAACATCCAAACAATCATATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCCGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCATTTCGCAACTGGAAAGAATCATTTCAAGCAGCAACACGGGAGCTTCAACGCATTTATGGAAAGGAAGAACTTAACCTATAA 1395 0.3907 MSLQNKGFWMVKGSGHSNDRETVFDNPSKIEPKRPHQWFVDAAEVDFFPNKKQAVEDADEKSSPGFSNVNIPPWENNPNFHSVPNQFIGRLFGSETRPVNFTEKNTSYVLADDSNVRSKMITNQYGDDASFGLSISHSIEDSEACVNFGGIKKVKVNQVKEDDVQALEGHNFSRQSNGDLHQAYNREVETRSASIGQAFDKDGDATLMGLTYGRGEAHVRSFSAPFVKGDDSIVSISESYNKEDTNIISFGGFPDERDIISVGRPAAEYDQLYNQSSVHVSTTAHEKELDVSSSDAVASTLQVAKVKSETVSKNKQELKTAKKEAPNSFPSNVRSLISTGILDGVPVKYISVAREELRGIIKGSGYLCGCQSCNYTKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFRNWKESFQAATRELQRIYGKEELNL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01566 464 PANTHER AUTOIMMUNE REGULATOR 8 438 - -
Pumo11g01566 464 Pfam Tify domain binding domain 359 414 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01566 Pumo-Chr11 46926838 46931471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01566 311 447 PHD Transcription Factor Family AT3G53680 52.899 8.95e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01566 - - gmx:100819317 908.672