Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01542 ATGCCAAGAAAAGGAATGAGAAGCATTTTCTTCAAGCCATCACCTCCTCCATCAACGTCCAGGTCATCACTACCACCTCCCTCCCCTCAACGCACTTTCTCAGACTCCTTAATGGACGAAAACATACAAACCGCAGAGACGCTCATAACTAAATGGGACGATTCCAATTCCAAAGTTACAACCCCGCTTTTCAGCGGCACGCGACAGGAAGCCAAACAGTACCTAAACGCCGTGAAGGGACTACAATCCGCTATGCAGTACCTCGTAGCACAGGATTCCTCCTCCAGCACCCTCGTCCGCGCTCAGTTTCTCATGCAACTCGCCATGAAGACGCTCCAGAAAGAGTTCTACCAGATTCTATCCTCCAACAGAGAACACTTGGATCCCGAAACCGTCTCCACGCGCTCCTCCGTCGACCACCGCAGCGTCTCCGACTATGTCTCCGATTACGACGACGAAATCTCAATCACCGAGGACGAGTTCCGTGTCTCCGAGACCGAGCGAGTTTCCATGCTCGCCATGGACGATTTGAAATCCATAGCGGATTGCATGATTTCCTCCGGATACGGCAAAGAGTGTGTCAAGGTTTACATCATCATGAGAAAATCGATCGTCGACGAAGCGCTGTACCATCTCGGAGTGGAAAAATTGAGCCTCTCTCAGGTTCAGAAACTGGACTGGGAGGTTCTCCAGTTGAAGATCAAGAGCTGGTTACACGCCGTTAAAGTCGCCGTCGGAACTCTGTTCCACGGCGAGAGGATCCTCTGCGATCACGTTTTCGGCGCGGATTCGGGAAAGAGAATCGCGGAGTCATGTTTCGCGGAAATAACCAAAGACGGCGCCGTATCGCTGTTCGGATTCCCGGAAATGGTGGCGAAATGCAAGAAAACGCCGGAGAAAATGTTCAGGACTTTGGATTTGTACGAAGCGATCTCCGACCACTGGCCTCAGATCGAATCCATATTCTCCTTCGAATCTACGTCCAACATTCGCTTACAGGCCGTTACGTCGATGGTGAAACTCGGCGACGCGGTTAGAACGATGCTAACGGACTTCGAAACCGCGATTCAGAAGGAGTCCTCGAAGAAACCGGTCCCTGGCGGTGGAATCCACCCTCTCACGCGCTACGTGATGAACTACCTCACGTTCCTCGCCGATTACAGTGGCGTGTTGGTGGATATAATCGCCGATATGCCGCAATCGCCGATGCCGGAGTCTTACTACCGCAGCCCGATGCGCGAGGAAAACCCGCCGGCTTCGGAGTTATCGGAGCGAATCGCGTGGCTCATACTCGTCGTGCTGTGCAAGCTCGACGGCAAAGCGGAACTATACAAGGACGTGGCGCTTTCTTACCTGTTTCTCGCGAATAACATGCAATACGTCGTGGTAAAGGTGCGCAAATCGAACCTAGGGTTCCTTCTCGGCGAGGAGTGGTTAGCGAAGCATGAATTGAAGGTTAAGGAGTACGCGTCAAACTATGAGCGCGTCGGTTGGAGCGCGGTGTTATCATCGTTGCCGGAAAATCCCGCGGCGGAGCAGGCCAGGGCCTGCTTCGTGAAGTTCGACGCTGTGTTTCATGAAGCGTGTAGAAAACAGTCCTCGTGGGTCGGTATCCGACCCGAAATTTCGAGATGA 1635 0.5291 MPRKGMRSIFFKPSPPPSTSRSSLPPPSPQRTFSDSLMDENIQTAETLITKWDDSNSKVTTPLFSGTRQEAKQYLNAVKGLQSAMQYLVAQDSSSSTLVRAQFLMQLAMKTLQKEFYQILSSNREHLDPETVSTRSSVDHRSVSDYVSDYDDEISITEDEFRVSETERVSMLAMDDLKSIADCMISSGYGKECVKVYIIMRKSIVDEALYHLGVEKLSLSQVQKLDWEVLQLKIKSWLHAVKVAVGTLFHGERILCDHVFGADSGKRIAESCFAEITKDGAVSLFGFPEMVAKCKKTPEKMFRTLDLYEAISDHWPQIESIFSFESTSNIRLQAVTSMVKLGDAVRTMLTDFETAIQKESSKKPVPGGGIHPLTRYVMNYLTFLADYSGVLVDIIADMPQSPMPESYYRSPMREENPPASELSERIAWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFLLGEEWLAKHELKVKEYASNYERVGWSAVLSSLPENPAAEQARACFVKFDAVFHEACRKQSSWVGIRPEISR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01542 544 MobiDBLite consensus disorder prediction 1 34 - -
Pumo11g01542 544 Pfam Exo70 exocyst complex subunit 235 536 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo11g01542 544 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 536 IPR004140 GO:0000145|GO:0006887
Pumo11g01542 544 SUPERFAMILY Cullin repeat-like 44 536 IPR016159 -
Pumo11g01542 544 Gene3D Exocyst complex component Exo70 47 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01542 Pumo-Chr11 46550783 46552417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01542 10 542 EXO70 exocyst subunit family AT5G59730 50.638 5.49e-176 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01542 K07195 - gmx:100810579 924.465