Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01534 ATGTACACACATCGCAACACCTTACTCTCACGCGCCGCCGACTCCCTCGGCCACTTTCTCTCTCCCCCGGACGCGTCCACGGCGTCGCCAATGCAGTACGCCACCGCTCCTCAGCCGCACCACCACCAACACCAACTCGCCCTCGGCGAGTTCGACTCGCTGCACGAACTCAACTCGGAGGTGAGTTCGAATAACACGTACAACAGTTGCAGCAGCGGGTGCACAAGCTACATGGGGTCGCCGAGTTCGCTGGCGAGTTACGATAGTCGACGGGTGCAGAGGAGCGTTAGCAGCCACTCGCTGCAGAAGAATAGTGGGGCCCACCACCCCTTTTCTCATCTTTTCGCTGAGTTGATTGACTCGGAAAACGCTCCCGTACGGCGAGCTTGCAGTACCGGTGACCTTCAGAGATTCAATGGAATGCAACATTTTCATCATTCTGATAACTCATTGTCAAGTGAAAGTAGTTTGATCATAGAAGAAATGAGCAGAACCAGTCCTTACAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGAACAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAGTATGCTTGCAGGAAGACTTTGGCAGATAGCAGGCCACGTATCAGAGGGCGATTTGCAAGGAATGACGAAATTGCAACGAACCCTCCAGTTCAGTGGAGTCACATGGGTACTGGAGAGGAAGAGGATGAAGAGGAAGAGGATTGGGCCAATTTCTTTGATTCCTTAGTTCCTACAAATCTTGCTCAGGAGCCTCAAGGCAGTAGTTCCTCCTTTGGTGTCTTCTATTAA 810 0.5148 MYTHRNTLLSRAADSLGHFLSPPDASTASPMQYATAPQPHHHQHQLALGEFDSLHELNSEVSSNNTYNSCSSGCTSYMGSPSSLASYDSRRVQRSVSSHSLQKNSGAHHPFSHLFAELIDSENAPVRRACSTGDLQRFNGMQHFHHSDNSLSSESSLIIEEMSRTSPYSPEEKKVRIERYRNKRNQRNFGKKIKYACRKTLADSRPRIRGRFARNDEIATNPPVQWSHMGTGEEEDEEEEDWANFFDSLVPTNLAQEPQGSSSSFGVFY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01534 269 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 32 242 IPR045281 GO:0009909
Pumo11g01534 269 MobiDBLite consensus disorder prediction 25 39 - -
Pumo11g01534 269 Pfam CCT motif 175 215 IPR010402 GO:0005515
Pumo11g01534 269 ProSiteProfiles CCT domain profile. 173 215 IPR010402 GO:0005515
Pumo11g01534 269 MobiDBLite consensus disorder prediction 20 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01534 Pumo-Chr11 46414596 46417726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01534 169 218 C2C2-CO-like Transcription Factor Family AT5G15850 48.000 6.85e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo11g01534 CCT 1.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01534 - - gmx:102667610 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03931 4 79916519 79919189 Pumo11g01534 11 46414596 46417726 PCT