Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01528 ATGGAGGCATTTCCAAGGGACCAACGTGGCTCGCTCGAAGTGTTCAACCCTTCTTCTTCTTACTCCACCGAGAAGCCGGTGAACTCACCGTTACGCGGTCAATCCACGTGGAAGACGTGGATTGACTCGCGCGACGACGAACCACCGGAACAACAACAACAATGTGGCGGTACCGACGAGATCACCGCCACGTCATGGATGGCGCTCAAGGACTCCACTCCGCCGCCGCCGACGCTCGCCGCGGTGCTCGGCGAGCCTCTGCCGCCACCGGCGGAGGTCGGCACCGCGGCGAAGCGTGCCGCGGAGTGGGGTCTGGTGCTGAAGACGGACACGGAGACCGGGAAGCCGCAGGGAGTGGCGGTTCGGACCTCCGGCGGGGAGGAGCCGAGCGCGAAGGTGGCCGGCGGGTCGAGGAGGGACTCGAGCAACTCCGTTCGGAGCTCCGGCGAGTCCTCCGACGACGGGAGGGAGTACCGGGGGGGAATACCGAGGGTTTCGGAGGACCTGAGGGACGCTTTGTCGGCGTTTCAACAGACTTTCGTGGTTTCGGACGCTACCAAACCCGATTACCCAATCATGTATGCCAGTGCCGGGTTTTTCAAGATGACGGGTTATACGTCCAAGGAGGTCATTGGGAGAAACTGCCGGTTTTTACAGGGAGCAGACACGGATCCGGATGATGTGGCAAAGATAAGGGAAGCTTTACAAACCGGGTCTACTTACTGTGGAAGGTTACTCAATTACAAGAAAGATGGCACTCCCTTTTGGAACCTTCTCACTATTGCCCCTATCAAGGACGACGATGGCAGAGTCCTCAAATTCATCGGAATGCAAGTGGAGGTTAGCAAGCATACAGAGGGGACCAAGGAGAAGATGCTACGTCCCAATGGATTGCCCGAATCCTTGATTCGATACGATGCTCGTCAGAAAGAGAAGGCAAATAGTACAGTATCTGAGTTGTTGCTGGCTGTGAGGAGGCCTCGGGCACTGAGTGAATCAGCAGGCCGTCCCTTGATCAGAAAGTCAGCATCTGGTTCCGGCGATGATGCACAAGACAAACCAGAAAAGTCATCTAGGAGAAAATCTGAGAGTGTGGCTTCTTTTAGACGCAAATCACATGCTGGAGACAGAAGTTCAATGGAGAGAATCACTGAGCTACCTGAAAAGAAACACAAGACCTCTCGTCGCCGTTCTTTCATGGGGTTCATCAGGAAAAGTCAGTCCAACTTAAGCTTCAATGATGAAGCAGTTGTTGAGGACAGCTCTGAGAGTAGTGATGAGGATGATGAGAGGCCTCATAGTTTTGATGGCAAAGTACAGAAGAAGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGGCTGCCGGACAACCCCATTATCTTTGCATCTGATAGCTTCTTAGAGCTCACAGAGTATAGTCGCGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGGCCTGAAACTGATCCAGCAACAGTGAGAAAAATTAGAGAGGCTATTGACAATCAAACGGACGTCACTGTGCAGCTCATTAATTATACCAAGAGTGGTAAAAAGTTCTGGAACTTGTTTCATTTGCAGCCTATGCGTGATCAGAAGGGAGAGGTACAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGACGATACTGCAAAAGAGGGAGAACAATTGGTAAAAGAGACTGCTGAAAATGTTGATGATGCACTGAGAGAACTTCCAGATGCTAATATGAAACCAGAAGATTTATGGATGAATCATTCAAAAGTGGTTCACCCCAAGCCTCATAGGAGGGATGAAGCTGCTTGGAAAGCCATTCAGAAGATCCTAGAGAGTGGAGAGCAGATAGGTTTGAATCATTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGCAGTGTCTATCTGGTGGAGCTATGTGAAACTGGTCATTATTTTGCCATGAAAGCTATGGAGAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGCGAGAGATCCTCGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAGACACATGTTTGTTTGATAACTGATTATTGTTCTGGTGGAGAACTATTCCTTCTTCTTGACCGACAGCCAGCTAAGGTTCTCAGGGAAGATGCAGTGAGATTTTATGCCGCTGAAGTAGTTGTTGCGTTGGAGTATCTTCATTGTCAAGGGATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTTCAAGGCAGTGGACATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGCTTCTAGTTCCAACTATAAATGAAAAGAAGAAAGCACAGAAAGGTCAACAGGCTCCAATATTTATGGCTGAACCTATGAGAGCATCAAACTCTTTTGTGGGCACTGAAGAGTACATAGCTCCGGAAATTATAACGGGTTCAGGCCATACAAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTTTATATGAAATGTTTTATGGGTATACACCATTCAGGGGAAAGACTAGGCAAAGAACATTTACAAATATTCTCCACAAAGACCTTAAATTTCCAAAGGGTAAACAGGTAAGTTTCAGTGCAAAGCAGTTAATGTACCGGTTGTTGAACAGAGACCCCAAAAGCAGATTGGGTTCAAGAGAAGGAGCAAATGAAATTAAGAACCATCCTTTCTTTCGGGGTGTCAATTGGGCCTTAGTTCGTTGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTTCGAGACAACTGAAGAAGGAGAAAAGGAAGCCAAATTTGAAGATCAAGTGCAAGAGGAGATGAACGTCTTCTGA 2937 0.4774 MEAFPRDQRGSLEVFNPSSSYSTEKPVNSPLRGQSTWKTWIDSRDDEPPEQQQQCGGTDEITATSWMALKDSTPPPPTLAAVLGEPLPPPAEVGTAAKRAAEWGLVLKTDTETGKPQGVAVRTSGGEEPSAKVAGGSRRDSSNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPDDVAKIREALQTGSTYCGRLLNYKKDGTPFWNLLTIAPIKDDDGRVLKFIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSTVSELLLAVRRPRALSESAGRPLIRKSASGSGDDAQDKPEKSSRRKSESVASFRRKSHAGDRSSMERITELPEKKHKTSRRRSFMGFIRKSQSNLSFNDEAVVEDSSESSDEDDERPHSFDGKVQKKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADDTAKEGEQLVKETAENVDDALRELPDANMKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKILESGEQIGLNHFRPVKPLGSGDTGSVYLVELCETGHYFAMKAMEKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGSGHVSLTDFDLSCLTSCKPQLLVPTINEKKKAQKGQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKTRQRTFTNILHKDLKFPKGKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTKPPELDAPLFETTEEGEKEAKFEDQVQEEMNVF 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01528 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Pumo11g01528 978 MobiDBLite consensus disorder prediction 413 443 - -
Pumo11g01528 978 Pfam Protein kinase domain 650 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01528 978 CDD PAS 192 281 IPR000014 -
Pumo11g01528 978 SUPERFAMILY PYP-like sensor domain (PAS domain) 462 561 IPR035965 -
Pumo11g01528 978 SMART pas_2 167 236 IPR000014 -
Pumo11g01528 978 SMART pas_2 448 517 IPR000014 -
Pumo11g01528 978 CDD STKc_phototropin_like 646 953 - -
Pumo11g01528 978 FunFam Putative LOV domain-containing protein 179 335 - -
Pumo11g01528 978 SUPERFAMILY PYP-like sensor domain (PAS domain) 186 278 IPR035965 -
Pumo11g01528 978 MobiDBLite consensus disorder prediction 1 36 - -
Pumo11g01528 978 MobiDBLite consensus disorder prediction 12 36 - -
Pumo11g01528 978 Coils Coil 578 598 - -
Pumo11g01528 978 SMART serkin_6 647 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01528 978 Pfam PAS domain 186 282 IPR000014 -
Pumo11g01528 978 Pfam PAS domain 469 561 IPR000014 -
Pumo11g01528 978 FunFam LOV domain-containing protein 435 599 - -
Pumo11g01528 978 ProSiteProfiles PAC domain profile. 520 574 IPR000700 -
Pumo11g01528 978 MobiDBLite consensus disorder prediction 41 60 - -
Pumo11g01528 978 Gene3D PAS domain 179 335 - -
Pumo11g01528 978 CDD PAS 461 561 IPR000014 -
Pumo11g01528 978 FunFam Putative LOV domain-containing protein 731 946 - -
Pumo11g01528 978 Gene3D Phosphorylase Kinase; domain 1 646 730 - -
Pumo11g01528 978 ProSiteProfiles PAC domain profile. 239 293 IPR000700 -
Pumo11g01528 978 ProSiteProfiles Protein kinase domain profile. 647 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01528 978 ProSiteProfiles PAS repeat profile. 446 519 IPR000014 -
Pumo11g01528 978 ProSitePatterns Protein kinases ATP-binding region signature. 653 676 IPR017441 GO:0005524
Pumo11g01528 978 MobiDBLite consensus disorder prediction 346 392 - -
Pumo11g01528 978 MobiDBLite consensus disorder prediction 427 443 - -
Pumo11g01528 978 SUPERFAMILY Protein kinase-like (PK-like) 630 953 IPR011009 -
Pumo11g01528 978 Gene3D PAS domain 435 599 - -
Pumo11g01528 978 SMART pac_2 242 284 IPR001610 -
Pumo11g01528 978 SMART pac_2 523 565 IPR001610 -
Pumo11g01528 978 Gene3D Transferase(Phosphotransferase) domain 1 731 946 - -
Pumo11g01528 978 ProSiteProfiles PAS repeat profile. 165 236 IPR000014 -
Pumo11g01528 978 MobiDBLite consensus disorder prediction 67 162 - -
Pumo11g01528 978 MobiDBLite consensus disorder prediction 332 397 - -
Pumo11g01528 978 FunFam LOV domain-containing protein 646 730 - -
Pumo11g01528 978 PANTHER FLIPPASE KINASE 1-RELATED 456 957 - -
Pumo11g01528 978 NCBIfam PAS domain S-box protein 192 286 IPR000014 -
Pumo11g01528 978 NCBIfam PAS domain S-box protein 471 561 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01528 Pumo-Chr11 46313424 46329847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01528 3 978 AGC Kinase Gene Family AT3G45780 69.509 0.0 1336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo11g01528 Pkinase 3.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01528 K20715 - gmx:100804524 1804.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03925 4 79845612 79859745 Pumo11g01528 11 46313424 46329847 PCT