Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01526 ATGGGTTGCTTCTGTTGCCCAGGGAAATCAAGCAAAAAATTGGTTACCGAAGAAGACTATAGCGACACCCTCGACCAGAAACCCTCCAATTTCACTTCTGCAGATAGCGTCAAAGTTGATTTCAAAGTGAATGGGAAAAAGGAAGATGATTCTAAAGGTGATCAACTTGCTCTGGACGTGAAGAGTTTAAATTTGAAAGAGGAGGTTTCTCAGGAAGGAAAAGATAATGGCAATCGAGCACAGACATTCAGTTTTAACGAACTTGAAGCTGCGACGGGAAATTTTAGGTTGGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTAACGGACTTCAAGGGATTCGGGAATTTGTTGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATCTTGTGAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAGTACATGCCATTGGGATCTTTGGAGAACCATTTGCTTGATATTCGGCCTGGTAGAAAACCACTTGATTGGAACACAAGAATGAAAATAGCAGCTGGCGCAGCTAGGGGTTTGGAGTATCTGCATGATAAAATGAAGCCTCCTGTAATATATCGCGACTTGAAATGTTCTAACATTTTGTTAGGAGAGGGATATCATCCTAAGTTGTCCGATTTTGGCTTGGCAAAAGTGGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGCACATATGGGTATTGTGCCCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCAGATGTTTACAGCTTCGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAAGCCATTGACCATACAAAACCTGCCAAAGAACAAAATCTAGTTGCATGGGCAAGACCCTTGTTCAGAGACAGGAGAAAATTTTCACAGATGGTTGACCCATTACTTGAAGGTAAATATCCCGTGAGAGGCTTATACCAAGCTCTTGCCATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTAATAGTTGATGTGGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCCCAACTTCATCCAGCACAAAGCTCTAGAAGAAGTCCATCCTCTCAGATAATGAAAAGGGATGATGATGATCATAGACATATTTTAAGCATGGAGCATGAGACAGACAGATCTTAA 1251 0.4253 MGCFCCPGKSSKKLVTEEDYSDTLDQKPSNFTSADSVKVDFKVNGKKEDDSKGDQLALDVKSLNLKEEVSQEGKDNGNRAQTFSFNELEAATGNFRLDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLLDIRPGRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDVYSFGVVLLELITGRKAIDHTKPAKEQNLVAWARPLFRDRRKFSQMVDPLLEGKYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQSSRRSPSSQIMKRDDDDHRHILSMEHETDRS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01526 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pumo11g01526 416 SUPERFAMILY Protein kinase-like (PK-like) 81 393 IPR011009 -
Pumo11g01526 416 MobiDBLite consensus disorder prediction 380 416 - -
Pumo11g01526 416 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Pumo11g01526 416 SMART serkin_6 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01526 416 PANTHER OS07G0668900 PROTEIN 48 380 - -
Pumo11g01526 416 MobiDBLite consensus disorder prediction 393 416 - -
Pumo11g01526 416 CDD STKc_IRAK 101 370 - -
Pumo11g01526 416 FunFam Serine/threonine-protein kinase PBS1 172 387 - -
Pumo11g01526 416 Gene3D Transferase(Phosphotransferase) domain 1 172 390 - -
Pumo11g01526 416 Gene3D Phosphorylase Kinase; domain 1 64 171 - -
Pumo11g01526 416 Pfam Protein tyrosine and serine/threonine kinase 98 307 IPR001245 GO:0004672|GO:0006468
Pumo11g01526 416 FunFam probable serine/threonine-protein kinase RLCKVII 67 171 - -
Pumo11g01526 416 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01526 Pumo-Chr11 46286405 46291249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01526 1 374 Glycoside Hydrolase AT3G07070 56.383 2.72e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo11g01526 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01526 - - gmx:100804000 790.801