Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01525 ATGCACAACTTTCCATCTCATTCAAATGGCACTCCTCCAAATCAACAATCTAATGGGAGCAACAACATCAATGACATGGCCTCCACTAATTCATATCTTGGCACCAAAACTTTTGATAAGAAGCCAGAGTCTGGAAGAGGGATTGGCTCGTTTAATTCTCATGAACTCCTAACTGTGCAGAAAAATAGCATCTCTTCATCTCAGAAGAAAACTTCTGCCCGGGAAGAATATACAGAAATCGTTAAAGAATCAGTGGGAGGCTCTGAACAAGGATTCCAAGTCGAGCACACTCACTATCAGCTTCACCATTATAATCACATTGCCCATAAAGCTGCAGTAGATCTCCAATCAGATCATGATCTCTTACTGAAAAGCTCAACCAAAGCTGCTCAGCAATGTGTGTCGTCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTATGGTATGGATGGAAATGCAGCGGAGAGCGATCATGGGAGCAATAATGGACAGGATGGAAGCAACACCTTGACAATCAGAACAATGAATTTTGAAAACGGCAATGTGGCTGCTGGGAGCGTTGGAATTGGTGGCATTGATAGGAAAAGCATTGGGAATGGGGCTGATGAAGGACGACTTGCATTGAGAGAGGCTGCCTTGACCAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAGAGGGTTCGATATCACAGCAGGAAAAAACTAGCAGAACAGCGGCCACGTATTAGGGGACAATTTGTCAGACGGATAGTGTCTGAAGCCAAAGAAGAAAAAGATAAACACAGTGGCAACCTGGTACCTGGGGATAATTCTATGGACATTCCACAATAA 846 0.4326 MHNFPSHSNGTPPNQQSNGSNNINDMASTNSYLGTKTFDKKPESGRGIGSFNSHELLTVQKNSISSSQKKTSAREEYTEIVKESVGGSEQGFQVEHTHYQLHHYNHIAHKAAVDLQSDHDLLLKSSTKAAQQCVSSNAFGGPAESNAANYGMDGNAAESDHGSNNGQDGSNTLTIRTMNFENGNVAAGSVGIGGIDRKSIGNGADEGRLALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSEAKEEKDKHSGNLVPGDNSMDIPQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01525 281 MobiDBLite consensus disorder prediction 1 37 - -
Pumo11g01525 281 MobiDBLite consensus disorder prediction 145 173 - -
Pumo11g01525 281 ProSiteProfiles CCT domain profile. 212 254 IPR010402 GO:0005515
Pumo11g01525 281 MobiDBLite consensus disorder prediction 1 49 - -
Pumo11g01525 281 MobiDBLite consensus disorder prediction 158 173 - -
Pumo11g01525 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 254 IPR045281 GO:0009909
Pumo11g01525 281 MobiDBLite consensus disorder prediction 258 281 - -
Pumo11g01525 281 Pfam CCT motif 212 253 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01525 Pumo-Chr11 46269647 46271061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01525 94 257 Response Regulator Gene Family AT5G02810 41.618 2.29e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo11g01525 CCT 4.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01525 K12129 - gmx:100785796 330.487