Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01518 ATGGCCGGAGTTAATCCGAACGGCGTCGCCGATTTTCCGGCGGTTCCGACGCACGGCGGACAGTTCATTCAGTACAACATATTCGGAAACCTCTTCGAGGTTACGGCGAAGTACCGTCCTCCGATCATGCCTATCGGTCGCGGCGCTTACGGAATCGTTTGCTCGCTGTTGAATACTGAGACGAATGAGCTGGTTGCTGTTAAGAAGATAGCGAACGCTTTCGACAATCACATGGACGCTAAGCGTACGCTCCGTGAGATTAAGCTTCTTAAGCATTTGGATCATGAAAATGTAATTGGTTTGAGAGATGTTATTCCTCCACCATTGCGTAGAGAGTTTAATGATGTCTACATAGCCACTGAACTCATGGATACTGATCTTCACCATATCATTCGCTCCAATCAAAGTCTGTCAGAGGAGCACTGCCAATACTTCTTGTACCAGATTCTTCGTGGGCTTAAGTATATACATTCTGCAAACATAATCCATAGAGATTTAAAACCAAGCAACCTGCTGCTGAATTCAAATTGTGACTTGAAGATTATTGATTTTGGTCTTGCCAGACCAACTTTGGAAAGTGACTTCATGACAGAATATGTAGTCACAAGATGGTACAGAGCTCCCGAATTGTTGTTGAACTCTTCTGATTACACCTCTGCGATAGATGTGTGGTCTGTTGGTTGCATCTTTATGGAGCTTATGAATAAAAAGCCTCTGTTTCCGGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACCCCAACTGAGGCTGACCTTGGGTTAGTGAAAAATGAAGATGCGAGAAGATATATCAGACAACTTCCTCTATATCCTCGCCTACCCTTAGCTCAGGTCTTCCCCCATGTTCATCCCGCAGCCATTGATCTTGTTGATAAAATGTTGACAGTTGATCCCACCAAAAGAATTACAGTTGAAGAAGCACTAGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAATCTGCATGGAGCCTTTCTCATTTGATTTTGAGCAACAGCAATTGGATGAAGAGCAAATAAAAGAGATGATCTACAGGGAAGCATTAGCACTCAATCCTGAGTATGCTTAA 1116 0.44 MAGVNPNGVADFPAVPTHGGQFIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLKHLDHENVIGLRDVIPPPLRREFNDVYIATELMDTDLHHIIRSNQSLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNSNCDLKIIDFGLARPTLESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTEADLGLVKNEDARRYIRQLPLYPRLPLAQVFPHVHPAAIDLVDKMLTVDPTKRITVEEALAHPYLEKLHDVADEPICMEPFSFDFEQQQLDEEQIKEMIYREALALNPEYA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01518 371 Pfam Protein kinase domain 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01518 371 SUPERFAMILY Protein kinase-like (PK-like) 44 333 IPR011009 -
Pumo11g01518 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pumo11g01518 371 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Pumo11g01518 371 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Pumo11g01518 371 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01518 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 327 - -
Pumo11g01518 371 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01518 371 CDD STKc_TEY_MAPK 32 368 - -
Pumo11g01518 371 FunFam Mitogen-activated protein kinase 123 352 - -
Pumo11g01518 371 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
Pumo11g01518 371 FunFam Mitogen-activated protein kinase 24 133 - -
Pumo11g01518 371 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01518 Pumo-Chr11 46093691 46097344 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01518 10 371 MAP Kinase Gene Family AT3G45640 83.978 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo11g01518 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01518 K20536 - gmx:100801339 738.028