Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01515 ATGGATCGGTTCGTAGAAAACTTGCCACCAATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTCCAGCTCATCATCCCCGCCGAGTCCGCGCACCGCGCCATCACCTATTTAGGCCAACTCGGCCTCCTTCAATTCCGCGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGACCAAATCAATAAAGCTGGTCTAATGTCTTCTCCTTCAGTCTTGCAATCAGATATTTATCTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAACAGTGAGAAACTTCGGCAATCATATAATGAACTCCTGGAGTTCAAGATTGTATTACAAAAGGCATGTGGTTTTCTTGTTTCAAGTCGTGTCAATGCTGTTTCAGAAGAGAGAGAACTGGAGGAGAATGTTTTCTCAAATGGAGACTATATTGAGACACCATTTTTGTTTGAACAGGAAATGAGGCCTGCACCATTAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAAGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGATGAACAAATCATAGATCCTATTTCAACTGAGATGGTTGAGAAAATTGTGTTTGTGGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATTCTGAAAATTTGTGATGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAGAGGCAAATAACTTCGGAGGTTTCATCCCGTCTTGCTGACTTAGAGGCAACTCTGGATGCTGGGATTAGACATCGGAATAAGGCTCTAGCTTCTGTAGGAAGCCATTTAACAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTAGTTGGAGAGGGCTGGTGCCCTATATTTGCAAAAACACAGATTCAGGAGACACTGCAACGTGCAACTTTTGACAGCAGTTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACCAATAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTATACAACTATTATATTCCCATTTCTTTTCGCGGTTATGTTTGGCGACTGGGGTCATGGAATTTGCCTTTTGCTGGGAGCGTTGGTTCTTATAGCACGTCAAAGCAAGCTCAGCACTCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTACTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTATCACATATTTGGTGCATCTGCTTACAAATGCCGAGATAGTTCATGCAGGGATGCACATACTATTGGCTTAGTAAAATACCGAGAACCATATCCTTTTGGTGTGGATCCCAGTTGGCGGGGAAGTCGTTCAGAATTGCCTTTTCTTAACTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCACATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGCAACTCACTGGACATAAGGTTCCAGTTTGTGCCACAGATGATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATCGTTGTCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTCTAAGCCCTTTTGACAATCTTGGTGAGAATCAATTGTTCTGGGGCCAAAGGCCACTTCAAGTTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTATGGTGTGCTTAATACCTCTGAGGTTGATCTTGAGTTGGAACCAGATTCTTCCAGGCAACATCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACAGCCTCATATCTACGACTCTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACCGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTGTGATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCAACTGCCTTTATACTACTAATGATGGAGACTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTAGAATTTCAAAATAAATTCTACAGCGGTGATGGATACAAGTTCAGACCTTTTTCCTTTGCCTCCTTAACAGAGGATGAAAATTGA 2457 0.4086 MDRFVENLPPMDLMRSEKMTFVQLIIPAESAHRAITYLGQLGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSPSVLQSDIYLEDLEIQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSSRVNAVSEERELEENVFSNGDYIETPFLFEQEMRPAPLNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIIDPISTEMVEKIVFVVFFSGEQARTKILKICDAFGANCYPVPEDISKQRQITSEVSSRLADLEATLDAGIRHRNKALASVGSHLTKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQETLQRATFDSSSQVGIIFHSMDALESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARQSKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDSSCRDAHTIGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIILSYFNARFFGNSLDIRFQFVPQMIFLNCLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVVLLLLAVIAVPWMLFPKPFILKKLHNERFQGRTYGVLNTSEVDLELEPDSSRQHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYSGDGYKFRPFSFASLTEDEN 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01515 818 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo11g01515 818 Coils Coil 99 126 - -
Pumo11g01515 818 PANTHER VACUOLAR PROTON ATPASES 13 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo11g01515 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01515 Pumo-Chr11 46072934 46082559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01515 1 811 Primary Pumps ATPases(2) AT2G28520 80.245 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01515 K02154 - gmx:100800799 1576.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03910 4 79593800 79599966 Pumo11g01515 11 46072934 46082559 PCT