Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01511 ATGGGGAAAACACATGGTATGGGAGCTGCTCGCAAGTTGAAGTCCCACCGAAGAAGGCAGAGGTGGGCTGACAAATCATACAAGAAATCACATCTTGGAAATGAATGGAAAAAGCCATTTGCTGGATCGTCTCATGCAAAAGGCATTGTTCTTGAAAAAATTGGGATTGAGGCTAAGTAA 180 0.4333 MGKTHGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAK 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01511 59 MobiDBLite consensus disorder prediction 1 39 - -
Pumo11g01511 59 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 59 IPR006032 GO:0003735|GO:0005840|GO:0006412
Pumo11g01511 59 MobiDBLite consensus disorder prediction 9 25 - -
Pumo11g01511 59 FunFam - 25 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01511 Pumo-Chr11 46018059 46019871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01511 1 59 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 88.136 1.20e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01511 K02973 - gmx:100776345 125.946