Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01506 ATGGACTTCACCGAAGACTTGCAGTGCCTTCTATCGGAGCAAAACCGCGAGCTCGCCGCCGCGGAGGCCATGGAGTCCGACCTCGACTTCGCCTTCCGCCTCCAGTTACAGGAGGCCCTCGCGGCCTCCCTCGCCGCCCAACCCTCCTCCTCCGCCGGCGCGGTGGCGGAGATCGAACAACCCGTCGTCGCTGACGACGAAGCTCTGAACGCGACGGCGCTGCAGCGCGAGGAGCTGGCGCGCCTGGAGCGCGAGATGAAGGACCGGGAGCAGAGCGAGATGGAGATGAAGAAAACGAGGGAGGATCTCTGCCGTCGGATCCACGATCAGAAGGTGGCGAGGGAGATTTCGACGATTCCCGAGGCGGACTGGCAGCAGTGGGGCGATAACTTCGAGAAACCGTTCGGCGAGGGCTCATCGTCTTCTTCTTCGGGGAGGAGAGAGGAAGGTGTGGTTAGGGTTTACTTCAAGGGTTTGGTGAGCGAGGAAAACGTGAGGGGGCAGAAGGTCGTGTTGTCTGGAATTGGGGTTGCGATTTGTGACCTTAGCGATAATTTGATATTCGAGGTTTCTAAGTCGCTCCTTGGGAACGGAACTAGCAAGGTCGCTGCGGAGATTAAGGCTCTGATTGAGGCTTTCAATGCTGCCATTGCTTTGGACTTGAAGCGCGTCGTTTATTGTTGCGATTACTATCCCCTTTTCCAATTTGTGAGTGGAAAATGGCCTGCAAAACAGCGGAAGATTGCTATGTTGGTTGATCAAGTGAATCTGCTTCAAGGGAAGTTTTCGTACTGCAATCCAAGGCTTGTGGCCAGACATGATGTCAAGTTTGCATTTAAGCTTGCAAGAGATGCGATTGTGTCTCAGTCCACGAGGCCTGCAGAATCTGGGAGTAGGAGGAGTTTGAATTGA 912 0.5526 MDFTEDLQCLLSEQNRELAAAEAMESDLDFAFRLQLQEALAASLAAQPSSSAGAVAEIEQPVVADDEALNATALQREELARLEREMKDREQSEMEMKKTREDLCRRIHDQKVAREISTIPEADWQQWGDNFEKPFGEGSSSSSSGRREEGVVRVYFKGLVSEENVRGQKVVLSGIGVAICDLSDNLIFEVSKSLLGNGTSKVAAEIKALIEAFNAAIALDLKRVVYCCDYYPLFQFVSGKWPAKQRKIAMLVDQVNLLQGKFSYCNPRLVARHDVKFAFKLARDAIVSQSTRPAESGSRRSLN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01506 303 Gene3D - 152 292 IPR036397 GO:0003676
Pumo11g01506 303 FunFam RBR-type E3 ubiquitin transferase 152 289 - -
Pumo11g01506 303 SUPERFAMILY Ribonuclease H-like 173 286 IPR012337 -
Pumo11g01506 303 Coils Coil 4 24 - -
Pumo11g01506 303 Pfam Reverse transcriptase-like 168 285 IPR002156 GO:0003676|GO:0004523
Pumo11g01506 303 Coils Coil 72 102 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01506 146 290 C3H Transcription Factor Family AT2G19610 33.108 1.13e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01506 - - gmx:100790037 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01506 11 45936412 45937913 Pumo11g01506 11 45936412 45937913 ECH