Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01487 ATGGGGAAGAAGAAGGATAAAATCGTTCTTCCACCGGAGCTTCCGCCGGAGATCCCGGACGACGAAATTGAAGTTTCCGACGATGACCTCCAATTCGTCAAGGATAACCGCGCCTATGCCTCCTTGCTTTCCACCTTGGACACCCATTCAATCACCAAGCATGTTACACGGGTTGCTGATGCCAAAGATGATGCATTGGAGAAACTTTATGAGAAACGCATGCAAAAGAATGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTAGATGCTCTTCCAATCAAGACATTGGATGGGAAACTCCATTACCGGACAGCTACAAAGACAGTATCGGAAAATGATCCAAGTGAAGAGGGAACTGGAGAGGATGTCAATGCAGACAAAGGTATGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATGAGAAAAGAGGCAAAAAAGCAAGGAAATGAGGTGGCTAAAGCAGAAGTGGAAGAGACACCGCAAGCAGCAGTGCTGGCTGAGGTAAAAGAAGATCTTACAGCTGAGGAGGCATTTGAAAGTAAGAAGTGTAAACTTGCAGAATTGGGGAATGCCCTTCTTACAGATCCAGAATCCAATATTAAATTTCTGAAGGAGATGGTGCTGATATCTAAAGATAATGATCATACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTACCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCGAAGACTGTTAGAAAGATGCGTTATTATGAATCAACTCTTCTTTCAGCATACAAGGCATACTTGCAAAGGCTGATAGCCTTAGAAAAGAAGCCTTTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCAAACCCCCATTTCAACTTTCGTGAAAGTTTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAGGCTATAAGGAAACTTTGTTGTTCCGCAATTAAATCACTCTTTACAAATGAGGGTAAACATGGGGGTGAAGCTACTGTGGAGGCTGTTCGATTGATTGCCGATCATGTTAAAGCTCATAATTGTCAATTGCACCCAGATTCCGTTGATGTTTTCTTGTCCCTTTCATTTGATGAGGATCTTGTGAAGTCTGCAAAGATAGAAGAGGATCAGAAATTAAAAAACAAGAAAAATAAGAAAAGGAAAAACTCGGAGGCATCAAATCAGTTGGTGGAGAATGATAGAAAGAAAAGTAGGCAAGAATTGATTTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTTGCCCCTGATGTTATGGAGAGGAGACAGATGCAAACTGAAACACTCTCTGCTCTCTTCGAGACATACTTTCGCATTTTGAAGCATACAATGCAGTCCATAGGTGCCAGGCCTGAAGCAAACGCTGGGGCATTATCTGCTGCAGTGGAACCTCTCCCTTTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAACCATCTGAAAGTACTTGCTTCTGGAAGTAGCAACTCAGGCAACACTTCTGACAAGTGTTGTAAATGTTTGACCGTATCTGAACGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTGAATGTTGATTTACAAGACTTCTTTCTCCATCTTTACAATCTTGTGCTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGCGTTGGCGGAAGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAACGACTAGCAACGTTTTCACTTTGTGTTGGATCTGCAGATTCCATGGCTGCCTTGGTCACGGTAAAGCATCTCCTTCAGAAGAATGTCAAGTGCAGAAATTTGTTGGAAAATGACATTGGAGGGGGCTCTGCTTCTGGCACAATTCCTAAATATCTACCATATTCCACAGACCCAAATTTGAGTGGTGCCCTTGCCTCAGTACTTTGGGAACTCAATCTTCTGTCCAGGCATTATCATCCAGCTATATCAACACTGGCCTCGGGCATTTCAAGCATGAGTACTGCACATAATCAGGTCCTTTTATCCAAGTCCTCTCCAATACAAGCTTTTAAGGAAATGTCTCTGGACCAGGAATCATGTTTCACACAACAGAGTGACAGTATAAAATTAAATAACAAGAAGAGACGAGCAAATGGCCCTGCTATTTCACCTTCCATTGTTTCTACAACAGTTACGGGTTCATTTGATGACAATGAGTTGCAAAGGAAACTTAGTTCCCATTTTATGGTTCCTCATGACATAAAGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAGGACTGCTCTATCACTACAGCTATATGAACAATATAAGAAACAAAAGAAACGGTCAAAACCAAGTAGATGA 2499 0.415 MGKKKDKIVLPPELPPEIPDDEIEVSDDDLQFVKDNRAYASLLSTLDTHSITKHVTRVADAKDDALEKLYEKRMQKNALKKEKEETGLQVDRVDALPIKTLDGKLHYRTATKTVSENDPSEEGTGEDVNADKGMVKLTKAEKRAKLKKMRKEAKKQGNEVAKAEVEETPQAAVLAEVKEDLTAEEAFESKKCKLAELGNALLTDPESNIKFLKEMVLISKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLIALEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVRNISSTNEAIRKLCCSAIKSLFTNEGKHGGEATVEAVRLIADHVKAHNCQLHPDSVDVFLSLSFDEDLVKSAKIEEDQKLKNKKNKKRKNSEASNQLVENDRKKSRQELISKTREEVEADYKAASFAPDVMERRQMQTETLSALFETYFRILKHTMQSIGARPEANAGALSAAVEPLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKVLASGSSNSGNTSDKCCKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFLHLYNLVLEYRPGRDQGEALAEALKIMLCEDKQHDMQKTAAFIKRLATFSLCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSASGTIPKYLPYSTDPNLSGALASVLWELNLLSRHYHPAISTLASGISSMSTAHNQVLLSKSSPIQAFKEMSLDQESCFTQQSDSIKLNNKKRRANGPAISPSIVSTTVTGSFDDNELQRKLSSHFMVPHDIKENERLRKELDRTALSLQLYEQYKKQKKRSKPSR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01487 832 MobiDBLite consensus disorder prediction 111 132 - -
Pumo11g01487 832 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Pumo11g01487 832 SUPERFAMILY ARM repeat 211 610 IPR016024 -
Pumo11g01487 832 MobiDBLite consensus disorder prediction 1 22 - -
Pumo11g01487 832 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 819 IPR016903 -
Pumo11g01487 832 Coils Coil 66 86 - -
Pumo11g01487 832 PIRSF Noc3 1 828 IPR016903 -
Pumo11g01487 832 MobiDBLite consensus disorder prediction 411 429 - -
Pumo11g01487 832 Coils Coil 139 166 - -
Pumo11g01487 832 Pfam CBF/Mak21 family 555 710 IPR005612 -
Pumo11g01487 832 MobiDBLite consensus disorder prediction 401 429 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01487 1 808 Core DNA Replication Machinery Family AT1G79150 58.445 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01487 K14834 - gmx:100776136 1437.55