Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01467 ATGCTGACTCGTAAACGACTCGTCGTTTCGCTCTCTCTCGCCACTCTCCTTCTCATCTCCTCATTCTCCCTCACTCTCTGCACCAAAGCCACCCCTCAAAACGACAACGACGACGAAGATCTCAGCTTCCTCGAGGAACCCGATGACACCGCCGCCACTCCGCACCACGGCCACGGCCATTTCCCAGATCCCGACCAGTTCGACGACGACGATGGCGACGACGATGACTTCGGCGACTTCTCCGGCTTCGACCACGCGGCCGAGGAGGCCTTCAAGGAGCCCGAGGTCGACGACAAGGACGTCGCCGTTTTGAAGGAGCGCAACTTCACCACCGTCGTCGAGAACAACCGCTTCGTCATGGTCGAGTTCTACGCCCCCTGGTGCGGCCACTGCCAGGCCCTCGCGCCGGAGTACGCCGCCGCCGCCACCGAGCTCAAGCCCGACGGCGTCGTTCTGGCCAAGGTCGACGCCACCGTCGAGAACGAATTGGCGCACGAGTACGACGTTCAGGGTTTCCCCACCGTCTTCTTCTTCGTCGACGGAGTTCACAAGCCTTACACTGGCCAAAGAACCAAAGATGCTATAGTGACATGGATTAAGAAGAAGATAGGACCTGGTGTATCCAACATAACTACGGTGGATGATGCTGAACGCATATTGACCGCGGAAAGTAAAGTTGTTTTGGGCTTCCTTAACTCTTTAGTTGGTGCTGAGAGTGACGAGCTGGCTGCAGCATCAAAGCTTGAGGATGATGTCAATTTTTATCAAACTGTGGTACCTGATGTGGCAAAGCTTTTCCATATTGATGCAAGTGTTAAACGCCCTGCTTTGGTCTTGCTAAAGAAAGAGGAGGAGAAACTGAACCATTTTGATGGCCAATTTGTAAAAGCTGAAATAGCTGAATTTGTATCCTCCAACAAGCTTCCTTTGGTTACAACTTTTACAAGAGAAAGTGCCCCAGTAATCTTTGAAAGTCAAATCAAGAAACAGTTGTTGCTGTTTGTGACTTCAAATGACACAGAGAAGTTTGTTCCAGTATTTAAAGAAGCAGCAAAAATTTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAACTGGATAATGAAGATGTAGGAAAGCCTGTTGCAGATTATTTTGGTATCGCTGGGAATGGTCCCAAAGTACTTGCATACACAGGAAATGATGATGGAAGAAAATTTTTGCTTGATGGAGAGGTGACTGTTGACACAATTACGGCGTTTGGGAATGATTTCCTTGAAGACAAGCTAAAACCTTTCCTCAAGTCAGATCTAGTTCCTGAAAGCAATGATGGTGATGTGAAAATCGTTGTTGGGAATAACTTCGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTGCTCGAGATTTATGCTCCCTGGTGTGGCCACTGCCAAGCTCTGGAACCAACATACAACAAGCTTGCTAAACATCTTCGCAGCATTGAGTCTATTGTTATAGCCAAGATGGACGGAACCACAAATGAGCATCCCAGGGCCAAGTCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAGACTTCTGACCCTATTCCTGTTGATGTGGATCGTACTGTGGTAGCCTTTTATAAGTTCCTCAGGAAGCATGCATCAATCCCATTCCAGCTCCAGAAACCAGCCTCAATTACTAAACCCGGGAGTGAGAGTTCTGATGTCAAGGGGAGCCAGAGCAGCAGCACCACCGATGTGAAGGATGAATTATGA 1749 0.4877 MLTRKRLVVSLSLATLLLISSFSLTLCTKATPQNDNDDEDLSFLEEPDDTAATPHHGHGHFPDPDQFDDDDGDDDDFGDFSGFDHAAEEAFKEPEVDDKDVAVLKERNFTTVVENNRFVMVEFYAPWCGHCQALAPEYAAAATELKPDGVVLAKVDATVENELAHEYDVQGFPTVFFFVDGVHKPYTGQRTKDAIVTWIKKKIGPGVSNITTVDDAERILTAESKVVLGFLNSLVGAESDELAAASKLEDDVNFYQTVVPDVAKLFHIDASVKRPALVLLKKEEEKLNHFDGQFVKAEIAEFVSSNKLPLVTTFTRESAPVIFESQIKKQLLLFVTSNDTEKFVPVFKEAAKIFKGKLIFVHVELDNEDVGKPVADYFGIAGNGPKVLAYTGNDDGRKFLLDGEVTVDTITAFGNDFLEDKLKPFLKSDLVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRSIESIVIAKMDGTTNEHPRAKSDGFPTLLFFPAGNKTSDPIPVDVDRTVVAFYKFLRKHASIPFQLQKPASITKPGSESSDVKGSQSSSTTDVKDEL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01467 582 CDD PDI_b'_family 318 418 - -
Pumo11g01467 582 ProSiteProfiles Thioredoxin domain profile. 419 546 IPR013766 -
Pumo11g01467 582 NCBIfam protein disulfide-isomerase domain 105 202 IPR005788 GO:0003756
Pumo11g01467 582 ProSiteProfiles Thioredoxin domain profile. 82 204 IPR013766 -
Pumo11g01467 582 FunFam Protein disulfide-isomerase 434 547 - -
Pumo11g01467 582 MobiDBLite consensus disorder prediction 29 74 - -
Pumo11g01467 582 SUPERFAMILY Thioredoxin-like 434 545 IPR036249 -
Pumo11g01467 582 PANTHER PROTEIN DISULFIDE ISOMERASE 7 580 - -
Pumo11g01467 582 CDD PDI_b_family 207 306 - -
Pumo11g01467 582 ProSitePatterns Thioredoxin family active site. 120 138 IPR017937 -
Pumo11g01467 582 SUPERFAMILY Thioredoxin-like 94 204 IPR036249 -
Pumo11g01467 582 MobiDBLite consensus disorder prediction 553 576 - -
Pumo11g01467 582 Pfam Thioredoxin 101 201 IPR013766 -
Pumo11g01467 582 Pfam Thioredoxin 439 523 IPR013766 -
Pumo11g01467 582 FunFam protein disulfide-isomerase A2 203 307 - -
Pumo11g01467 582 Pfam Thioredoxin-like domain 242 415 - -
Pumo11g01467 582 NCBIfam protein disulfide-isomerase 99 582 IPR005792 GO:0003756
Pumo11g01467 582 SUPERFAMILY Thioredoxin-like 306 436 IPR036249 -
Pumo11g01467 582 MobiDBLite consensus disorder prediction 49 65 - -
Pumo11g01467 582 FunFam Protein disulfide-isomerase 90 202 - -
Pumo11g01467 582 Gene3D Glutaredoxin 204 307 - -
Pumo11g01467 582 MobiDBLite consensus disorder prediction 553 582 - -
Pumo11g01467 582 SUPERFAMILY Thioredoxin-like 209 318 IPR036249 -
Pumo11g01467 582 Gene3D Glutaredoxin 88 203 - -
Pumo11g01467 582 CDD PDI_a_family 103 199 - -
Pumo11g01467 582 Gene3D Glutaredoxin 308 432 - -
Pumo11g01467 582 CDD PDI_a_PDI_a'_C 439 541 - -
Pumo11g01467 582 PRINTS Thioredoxin family signature 168 179 - -
Pumo11g01467 582 PRINTS Thioredoxin family signature 127 136 - -
Pumo11g01467 582 PRINTS Thioredoxin family signature 119 127 - -
Pumo11g01467 582 Gene3D Glutaredoxin 433 547 - -
Pumo11g01467 582 FunFam Protein disulfide-isomerase 308 433 - -
Pumo11g01467 582 ProSitePatterns Thioredoxin family active site. 459 477 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01467 Pumo-Chr11 45142510 45146715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01467 K09580 - gmx:100790223 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03879 4 79126727 79134402 Pumo11g01467 11 45142510 45146715 PCT