Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01464 ATGGCTAAAGATGTCGAGGTTCAAGAGCAAGGAGAATTCTCTGCCAAAGACTATCAAGACCCTCCTCCAGCACCCTTGTTTGACCCAGAGGAGCTCACACAGTGGTCCTTCTATAGAGCCCTCATTGCTGAGTTCATAGCCACCCTTCTCTTCCTTTATGTCACCGTGCTAACCATTATTGGCTACAAAAGGCAGACTGATACCAAGGTAGGTGGCACCGAGTGTGATGGGGTTGGCATTTTGGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACCGCCGGTATTTCAGGAGGACACATAAACCCGGCGGTGACATTCGGGCTGTTCCTAGGACGCAAGGTGTCCTTAATAAGGGCGTTGTTGTACATGGTAGCACAGTGTGCGGGTGCTATCTGTGGCACTGGATTGGCCAAGGGGTTCCAAAAAGCATACTACAACAGGTATGGAGGTGGTGCCAACTCTGTTGCTGATGGCTACAACAAGGGCACTGCTTTGGGTGCTGAGATTATTGGTACCTTCGTTCTTGTCTACACTGTCTTCTCTGCCACTGACCCTAAGAGGAACGCTAGGGACTCCCATGTTCCTGTACTGGCACCACTACCTATTGGATTTGCTGTGTTCATGGTTCACTTGGCTACAATCCCAATTACTGGTACTGGCATTAACCCAGCAAGGAGTTTTGGAGCAGCTGTAATCTACAACGAGGACAAAATCTGGGATGACCAGTGGATATTCTGGGTTGGACCAATTGTTGGAGCAGCAGTGGCTGCATTCTACCACCAATACATCCTTAGAGCAGCAGCTATCAAGGCTCTTGGATCCTTCAGGAGCAACGCTTAA 858 0.4965 MAKDVEVQEQGEFSAKDYQDPPPAPLFDPEELTQWSFYRALIAEFIATLLFLYVTVLTIIGYKRQTDTKVGGTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCAGAICGTGLAKGFQKAYYNRYGGGANSVADGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNEDKIWDDQWIFWVGPIVGAAVAAFYHQYILRAAAIKALGSFRSNA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01464 285 SUPERFAMILY Aquaporin-like 30 271 IPR023271 -
Pumo11g01464 285 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 FunFam Probable aquaporin PIP1-2 24 285 - -
Pumo11g01464 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Pumo11g01464 285 NCBIfam MIP family channel protein 43 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 MobiDBLite consensus disorder prediction 1 23 - -
Pumo11g01464 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01464 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Pumo11g01464 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 274 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01464 Pumo-Chr11 45129306 45131558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01464 1 285 Major Intrinsic Protein MIP AT2G37170 81.404 9.89e-176 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01464 K09872 - gmx:100811119 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03877 4 79115547 79116702 Pumo11g01464 11 45129306 45131558 PCT