Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01457 ATGGCACGTCAGTATGTCCGCAGTGTGATTTCCTCTGTACAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAACCCGTCTGTTGGAGCTAAACTTTCTCCTGGTTCTCCAGAGGCTGTTACACTAGCTCACTGGATCTGCCAAAGTTATAGGCAAGTCTACTTATCTCGCTGTTTAACATTTTTGTCTTGGAATTTCTATTTGGGGTCTGACTTGCTGAGATCAGATTCTCTTGTTGGTGACTTGATGCTGAAACATCTGTGGCATCATCAGGATGCCATTCTATGCTGTTCACTGAAGTCATTGCCAGTGTTTATATTTGCAAATCAAGCTGGTCTTGACATGTTGGAAACAACTCTAGTGGCCTTACAAGACATCACATTGGATAAAATATTTGATGAGTCTGGACGTAAGGCATTGTGTACAGACTTTGCCAAGTTAATGGAGCAGGGATTTGCTTATCTGCCAGCTGGAATCTGCATGTCGACGATGGGGCGCCATGTGTCATATGACCAAGCCATTGCATGGAAAGTGCTTACTGGAGAAGACAATACTGTTCACTGCTTGGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 603 0.4328 MARQYVRSVISSVQRVAMAISPSGINPSVGAKLSPGSPEAVTLAHWICQSYRQVYLSRCLTFLSWNFYLGSDLLRSDSLVGDLMLKHLWHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCTDFAKLMEQGFAYLPAGICMSTMGRHVSYDQAIAWKVLTGEDNTVHCLAFSFINWSFV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01457 200 Pfam MEKHLA domain 63 199 IPR013978 -
Pumo11g01457 200 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 200 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01457 Pumo-Chr11 45037256 45038234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01457 1 200 Homeobox Transcription Factor Family AT5G60690 72.549 8.06e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01457 K09338 - gmx:100804870 360.918