Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01444 ATGAAGCTGCAGCTCAAAATTGCTCTTGCTTTAGTTAGCTTGCTTTGGATTCAGAGCTCATTTTGTGATGAAACTTCTGATACATCAAGCTTAAACAAGTGGAGATGTAGATGTTCTTTCCAAAGGAACCAGAGCTACTCTCTTGCTAATTGTTCAAAGTCATGTGATTGCCGCTCAGATTCTGAAGAGAGTGCATCCGTATGGACATGCATATGTGATTCCAATGGGTTTCCCCAAGTGGCAGCAGATGGTCATAGCCCAAATTGCTTTAATGCTTGCAACTGCACCTGGGGAACCGTCAGCAGGCCGGGAGGTTCAAAGAAGCATGTTTCCAGCAAGATTGTTGTAGTTATACTATTAGTATGTGTTATATGCACAACCATGGCATTTCTTGTCTCACTTATATGCCATGTCTACCGAAGGGACAGATGTACTATTCAATCACCAATATTCTCAACGGATAAGGAAACAAGCAGTGGTAGTACCGCCAACTTAATTAGTCATAGGTCAGGGACTTCTTCAGTGCCAGAAACAAAATATGCAATAAATTCTCCAATTTATCATATCACAGGTTGCTTTCAGAAAGCCTCTTTCTTATTTGGGAGCCCAAAAGAAACTTATCATGGGAGTATTTTTCCATTTTCGTTAGCCGAACTGGAACATGCAACAGAAAACTTTTCATCTTCCAACCTAATTGGGGTAGGCGGAAGTAGTTATGTATACCATGGTCGGCTGAAAGATGGTAGCAATGTGGCAGTTAAACGACTAAAAGATCAAGGAGGGCCAGAAGCAGACTCTGCATTTTTCAAGGAGATTGAACTATTATCTAGACTTCACCATTGTCATTTGGTTCCTTTGCTTGGATACTGCTCCGAGTTAAAAGGAAAACATGTTCAGAGGTTACTAGTATTTGACTACATGGCCAATGGAAATTTGAGGGACTGTTTAGATGGAGTTTCTGGAAAACATGTCGATTGGGCTACTCGTGTTATGATTGCAATAGGAGCTGCAAGGGGCTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAGATAACTGATCTTGGCATGGCTAAAAACTTGAGATCTGATGATCTTCCCAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGAACATTTGGCTATTTTGCACCTGAGTATGCCATTGTTGGTAAAGCTTCTCTTGAGTCAGATGTCTTCAGTTATGGGGTGGTTCTTCTTGAGCTTATCAGTGGTCGCCAACCCATCCATAAATCTACAGGCAAACAAGAAAGCCTTGTTATATGGGTATTTTAA 1353 0.4117 MKLQLKIALALVSLLWIQSSFCDETSDTSSLNKWRCRCSFQRNQSYSLANCSKSCDCRSDSEESASVWTCICDSNGFPQVAADGHSPNCFNACNCTWGTVSRPGGSKKHVSSKIVVVILLVCVICTTMAFLVSLICHVYRRDRCTIQSPIFSTDKETSSGSTANLISHRSGTSSVPETKYAINSPIYHITGCFQKASFLFGSPKETYHGSIFPFSLAELEHATENFSSSNLIGVGGSSYVYHGRLKDGSNVAVKRLKDQGGPEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGKHVQRLLVFDYMANGNLRDCLDGVSGKHVDWATRVMIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGKASLESDVFSYGVVLLELISGRQPIHKSTGKQESLVIWVF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01444 450 Pfam Protein kinase domain 228 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01444 450 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
Pumo11g01444 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Pumo11g01444 450 FunFam receptor-like serine/threonine-protein kinase NCRK 200 306 - -
Pumo11g01444 450 SMART serkin_6 226 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01444 450 ProSiteProfiles Protein kinase domain profile. 226 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01444 450 Gene3D Phosphorylase Kinase; domain 1 201 306 - -
Pumo11g01444 450 FunFam Os07g0541700 protein 307 398 - -
Pumo11g01444 450 Gene3D Transferase(Phosphotransferase) domain 1 307 450 - -
Pumo11g01444 450 SUPERFAMILY Protein kinase-like (PK-like) 206 441 IPR011009 -
Pumo11g01444 450 PANTHER OS01G0750732 PROTEIN 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01444 Pumo-Chr11 44857505 44860980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01444 1 448 Receptor kinase-like Gene Family AT2G28250 53.084 4.04e-154 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Pumo11g01444 Pkinase 1.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01444 - - gmx:100817870 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03860 4 78928719 78931874 Pumo11g01444 11 44857505 44860980 PCT