Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01434 ATGGCAAGTCTTGTACTTATCCACAAAATTATGCTTCATCTTTGGTTTGTTGCTTGGATGTGCTTAGGTATATGCTCAGCTCAATTGTCTTACGACCAAAGTAATTGTACTTCAAATGAAACTGGGCTAGGGACAAGATACAGTTGCAAGTCAACACAGGATTCATGCAAAACATTCTTGGTGTATAGAGCTAATAAGCATTTCAATACCATTTCAGAAGTGTCAAAGCTCTTCAACATGAACTCTGATGAGGTGCTTCAAAAAAACAACCTCCCATCTTCCTCTTTGTCTGAGGCACTCAAACAAGGTAAAGAGGTGCTTATTTCTGTTAATTGCACCTGCTCAGGCCAGTATTTTCAAGCCAGTTTAAGCTACAAAGTCCTTAACAACACAACATATTCCGAGATTGCTTGTGGTGTTTTTGAAGGGCTGCTGAAACATCTCACACTGGCTGAGGAGAACCTTTCACAAGGTAATAAGCCAGAAGCTGGTTCTGAGCTTCATGTGCCTCTCATATGTGCTTGTCCTGACAGCTACAATTTCACCAGGAGCAAGAAGGTGAAGTACCTTGTCACATACCCTCTTATACTGGGGGATGATCCAGACAAAGTTAGTGAAAAATTTGGCATCTCACCTGAAGAATTCTATGCAGTTAATAACTTGAATCCCTTGTCAACTGTTTTTCCTGATACAGTTGTTTTAGTTCCACTAAAGGATGGTCCAGTCAGAATACTTGATATTCCTGATTCTCCTTCTCCACCTCCTGGCTTTCTTCCCACAAATCCAGTGGTTATGACCGAGGAATCCACACAACCATCAAATTTGTACATTGCAGGATCTGTTATAGGATTTTTTTTGTTCATAACATTGCTTGCAAGCGGATTGTACATGAAGAGAATGAGGAAAAGTGATGTTGTCCATTCCTTTAGTCAAACAAACTCCCTCACTTTGTGGACACCAACTAGAAGCTCTCATATATCTACCCAAACGGGTAAAAGCTCTACAACCTGGTGCCTTTCCCCAGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACAGCATAGAAGAGCTTCAAAAGGCCACCAAGAATTTCAGTGAAGAGAACAAGATCTGTCACAACCGGGGTTGTGACGGCGACTTTGTCTACAAGGGCTCAGTCAATGATCATGAGGTGATGATAAAGAGGATGAGGTTGGAAGACACACAACAGGTGATTGATTTACATTCTAAAATCAACCACATTAACATTGTGAACTTGCTTGGTGTTTGTTATGGTGAGAGCAATAATGATTCATGGTCTTATTTAGTTTTTGAGTTTCCTAAAAATGGATGCTTGAGGGACTGCGTATCTGATCCATGCAACCCTCTAAATTGGTACAAACGGACACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTTCTTTTCCTTCCTATGCTCACATGAATGTTAGTAGTAGAAATATATTCATAACAGCAAACTGGAGGGGAAAACTGGCAGATGTTGGAAGGGCATTGGCTGCTAGTGCCACACTCACCAAAAGAAATGATGGTATGGAAATTCCCAAAGGGGTGGTGGCACCAGAGTTCCTCTTACATGGCTCAGTTTCTGAAAAGGTTGACATTTTTGCATTTGGGGTTGTTTTGCTTGAGTTGATCTCAGGAAAAGACAACTTTGATGGAAAACCAATCAAAGATTACCTTGGATTTTTGTTGGGGGAAGCCAGTGAAGGGGGTTGTTTTGAAGGGTTAAGGAGTTTCATGGATCCTAATCTGAAGGATTACTCTCTTCCAGAGGCTTTATGTTTGTCTTTCTTAGCAAAGGATTGTGTGGCAGATGATCCCCAGCATAGGCCAACTATGGATGATATCATGAAAGTCCTTGCAAAAATGGTTTAG 1917 0.4058 MASLVLIHKIMLHLWFVAWMCLGICSAQLSYDQSNCTSNETGLGTRYSCKSTQDSCKTFLVYRANKHFNTISEVSKLFNMNSDEVLQKNNLPSSSLSEALKQGKEVLISVNCTCSGQYFQASLSYKVLNNTTYSEIACGVFEGLLKHLTLAEENLSQGNKPEAGSELHVPLICACPDSYNFTRSKKVKYLVTYPLILGDDPDKVSEKFGISPEEFYAVNNLNPLSTVFPDTVVLVPLKDGPVRILDIPDSPSPPPGFLPTNPVVMTEESTQPSNLYIAGSVIGFFLFITLLASGLYMKRMRKSDVVHSFSQTNSLTLWTPTRSSHISTQTGKSSTTWCLSPDLLVGIKYYLLNYSIEELQKATKNFSEENKICHNRGCDGDFVYKGSVNDHEVMIKRMRLEDTQQVIDLHSKINHINIVNLLGVCYGESNNDSWSYLVFEFPKNGCLRDCVSDPCNPLNWYKRTQIAFDIATCLYYLHCCSFPSYAHMNVSSRNIFITANWRGKLADVGRALAASATLTKRNDGMEIPKGVVAPEFLLHGSVSEKVDIFAFGVVLLELISGKDNFDGKPIKDYLGFLLGEASEGGCFEGLRSFMDPNLKDYSLPEALCLSFLAKDCVADDPQHRPTMDDIMKVLAKMV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01434 638 ProSiteProfiles LysM domain profile. 191 235 IPR018392 -
Pumo11g01434 638 Gene3D Transferase(Phosphotransferase) domain 1 443 638 - -
Pumo11g01434 638 SUPERFAMILY Protein kinase-like (PK-like) 348 634 IPR011009 -
Pumo11g01434 638 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 637 - -
Pumo11g01434 638 ProSiteProfiles Protein kinase domain profile. 285 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01434 638 Pfam Protein tyrosine and serine/threonine kinase 390 633 IPR001245 GO:0004672|GO:0006468
Pumo11g01434 638 Gene3D Phosphorylase Kinase; domain 1 347 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01434 Pumo-Chr11 44723201 44725232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01434 47 638 Receptor kinase-like Gene Family AT2G23770 29.016 4.24e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo11g01434 PK_Tyr_Ser-Thr 2.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01434 - - gmx:100818937 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01434 11 44723201 44725232 Pumo11g01434 11 44723201 44725232 ECH