Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01428 ATGGAGATATTCGCCCAAGAAGTATATCGTAGCATGTCTAATTACACATCTGTGTTCAAGAGTGCAATAAAAAAAGAATTGGGTTATTGCATAGTTGATGTGGACGCTGATTGGAATGGGGCATTCAATTTCACCAAAGATCTTACGTTTTTGACCATTTGTGCCTCACAATTGAAAGGAGATATTACACAACGCATGTGCACAGAATCAGAAATACAAGCTTATGGCCAAAGTTTTGCTAATGGGAAGTCAGGAGCCAAATCCAACTTCTTGAAGCCCAACATAAATTGTAATATGAGCTCATGGGTTAATGGTTGTGAACCCGGTTGGGGTTGTAAAGCTAATCAGAAAGTAGACATTGGTAGTAACAAGAAGGACATACCTATTAGATCTATTGATTGCCAACCTTGTTGTGAAGGCTTCTTTTGCCCTCGTGGTCTCACTTGCATGATACCTTGCCCGTTAGGTTCGTATTGTCCACGTGCAGATCTTAATAAAACTAGTGGAGTATGTGAACCATATCGTTATCAGCTACCTCCTGGAAAGCCTAACCATACTTGTGGTGGGGCAGATATTTGGGCAGATATTCAGAGTAGCAGCGAGGTATTCTGTTCAGCAGGGTCATTTTGTCCCTCTACAATTGTAAAAAATCCTTGCAATAAGGGGTATTATTGTAGAACAGGTTCTACTGCTCAGGAGCGGTGTTTCAAGTTGGCAACTTGTGAGCCTCAGTCATCAAATCAAAATATTACTGCATATGGTGTCTTGGTTTTTGCTGGCTTGTGTTTTTTGCTTATTATCATATACAATTGTTCTGACCAAGTTCTTGCAACTCGAGAAAAAAGACAAGCAAAATCAAGAGAAAGGGCTGCTCAAAGTGTGCGAGAATCACAAGCACGTGAAAAATGGAAATCTGCAAAAGATATAGCTAAAAAGCATGCAGTAGGACTGCAATCACAATTATCACGTACATTTTCTCGCAAAACTTCAAAGAAGCCAGATTTGAAAGGTTTTGGTTCTAAACATTCAGATTCTGGTGTACCACCTGCTGGTACATCAAAAGGAAAGAAAAAGGACAAAAACAATCTCTCAAAAATAATAAATGATATTGAGGAAAATCCTGATAATCCAGAAGGGTTTAATGTTCAAATAGGAGATAAAAATGTCAAAAAACAAGCACCAAGGGGTAAGCAATTACATACTCAAAGTCAAATATTCAAGTATGCATATGGTCAGATTGAAAAAGAAAAGGCTATGGCAGAACAAAACAAAAACTTAACCTTTTCTGGAGTAATTTCAATGGCTAATGATATTGAGATAAGGAAGAGGCCTACCATTGAGGTTGCATTTAAAGATTTAACCCTCACTTTGAAAGGGAAAAACAAACATTTATTAAGATGTGTGACTGGTAAATTACATCCTGGTAGAGTTTCAGCAGTCATGGGTCCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCACACAACTGGGCAAGTTCTTGTAAATGGTCAAGAATCTTCTATCAGGTCATACAAGAAAATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAGGAAAATCTATGGTTTAGTGCTAGATGCAGGCTCTCTGCTGATCTACCAAAAGAAGAGAAGGTGTTAGTGGTTGAAAGAGTCATTGAGTCATTAGGTCTACAAGCAATAAGGGATTCTTTAGTTGGGACAGTGGAGAAACGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGATTGGAAATGGTTATGGAACCCTCCCTTCTAATTTTGGATGAACCCACTTCTGGTTTGGATAGTTCATCTTCTCAATTACTGCTTAGAGCACTTAGACGTGAAGCTCTTGAAGGAGTAAACATATGTATGGTCCTTCACCAACCAAGTTACACCTTGTTCAAGATGTTTGACGATTTTATACTACTTGCAAAGGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAAGTGGAAGAGTATTTTTCAAGCATGGGCATTAATGTCCCTGACCGTGTCAACCCTCCAGATTACTTCATTGACATTTTAGAAGGAATAGTAAAATTAAGCCCAAGCTTAGGAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTACCCTGTGCCCATGGATATGCTACAAAGTGTTGAAGGAATGGCTGCCCCAAGTGGTGAAGGTTCATCACATGGAGCAACAACTGTTGCACCAAATGAAGAAGCACCTTCTTTTGCTGGAGAACTTTGGCAGGATGTAAAGTGCAATGTTGAGATGAAAAAGGATAACCTTCACCTTAACTTCTTAAGTTCAAATGATTTGTCTAATCGAATAACACCAGGAGTGTTCAACCAATACAAATACTTTCTTGGAAGAGTTGGTAAGCAGCGACTAAGAGAAGCTAGAACACAGGCTGTGGATTTTTTGATTTTGCTACTAGCTGGCCTTTGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCATTTGGAGCAACTGGTTACACATACACTGTAATAGCAGTATCACTCCTTTCTAAAATTGCGGCTTTAAGATCATTCTCATTGGATAAGTTGCACTATTGGCGAGAAAGTTCTTCAGGCATGAGTAGCTTGGCTTACTTTCTATCAAAGGATACTGTTGACCATTTTAGCACAATCATCAAGCCACTAGTTTACCTTTCCATGTTCTATTTCTTCAACAATCCAAGATCATCAGTCACAGATAACTACATTGTTTTGTTGTGTTTAGTCTATTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTTCTTCAACCAGGTCCAGCCCAACTGTGGTCAGTGTTACTTCCAGTAGTGTTGACTCTGGTAGCAACCTATAACAATGAAGATAGCAAATATGTGAAATTTCTATCTGACTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCAAAAAGATATACTGGAGTTTGGTTAATAAGTCGATGTGGTGCGCTCTATTCTAATGGCTATGATCTTAAACATTGGTACCAATGTTTAGGCCTTCTTATCGTAATGGGAATAATTAGTCGCATGCTTGCATTTTTCTGTATGATAACCTTCCAGAAGAAATAG 3171 0.3895 MEIFAQEVYRSMSNYTSVFKSAIKKELGYCIVDVDADWNGAFNFTKDLTFLTICASQLKGDITQRMCTESEIQAYGQSFANGKSGAKSNFLKPNINCNMSSWVNGCEPGWGCKANQKVDIGSNKKDIPIRSIDCQPCCEGFFCPRGLTCMIPCPLGSYCPRADLNKTSGVCEPYRYQLPPGKPNHTCGGADIWADIQSSSEVFCSAGSFCPSTIVKNPCNKGYYCRTGSTAQERCFKLATCEPQSSNQNITAYGVLVFAGLCFLLIIIYNCSDQVLATREKRQAKSRERAAQSVRESQAREKWKSAKDIAKKHAVGLQSQLSRTFSRKTSKKPDLKGFGSKHSDSGVPPAGTSKGKKKDKNNLSKIINDIEENPDNPEGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKAMAEQNKNLTFSGVISMANDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGINVPDRVNPPDYFIDILEGIVKLSPSLGVNYKQLPVRWMLHNGYPVPMDMLQSVEGMAAPSGEGSSHGATTVAPNEEAPSFAGELWQDVKCNVEMKKDNLHLNFLSSNDLSNRITPGVFNQYKYFLGRVGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESSSGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSVTDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLVATYNNEDSKYVKFLSDLCYTKWALEAFVISNAKRYTGVWLISRCGALYSNGYDLKHWYQCLGLLIVMGIISRMLAFFCMITFQKK 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01428 1056 Gene3D - 436 688 IPR027417 -
Pumo11g01428 1056 FunFam ABC transporter G family member 24 442 684 - -
Pumo11g01428 1056 MobiDBLite consensus disorder prediction 319 361 - -
Pumo11g01428 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 685 IPR027417 -
Pumo11g01428 1056 MobiDBLite consensus disorder prediction 285 307 - -
Pumo11g01428 1056 Pfam ABC-2 type transporter 646 1056 IPR043926 GO:0140359
Pumo11g01428 1056 SMART AAA_5 474 675 IPR003593 GO:0016887
Pumo11g01428 1056 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 448 689 IPR003439 GO:0005524
Pumo11g01428 1056 ProSitePatterns ABC transporters family signature. 589 603 IPR017871 GO:0005524|GO:0016887
Pumo11g01428 1056 CDD ABCG_EPDR 446 672 - -
Pumo11g01428 1056 Pfam ABC transporter 468 617 IPR003439 GO:0005524
Pumo11g01428 1056 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 400 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01428 Pumo-Chr11 44626021 44632216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01428 475 670 Calmodulin-binding Proteins AT2G36910 27.907 1.97e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01428 - - gmx:100809312 2013.04