Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01415 ATGCAGAAATCGGGGTACGGTCGCGACGGAATATACAGGTCTCTAAGGCCTTCTTTGGTTCTCCCAAAGGACCCCAACCTCTCTCTCGTCTCATTCCTCTTCCAAAGCGTTTCCTCTTTCCCATCCAAAACCGCTCTCGTCGATGCCCACTCTTCCCAAACCCTCTCCTTCGCGCAGCTTAAATCACAAGTCGCTAAGCTCGCCCACGGTTTCCTCAAACTAAGCATCAAGAAAAACGACGTCGTTCTCTTGCTAGCTCCCAACAGCATCCACTTCCCCATATGCTTCCTCGCCGCCAACGCCATTGGAGCCGTCGTCTCCACCGCCAATCCCATCTACACAGTCAACGAACTCTCCAAGCAAGTCAACGACTCCAACCCCAAGCTCGTCATCACCGTCCCCGAATTATGGGACAAAGCCAAGAACCTCAACCTCCCCGCCGTAATTATCGATTCCGCAAACGCGCATAGCGATCTCAAAGGTCTTATTCATAGTTGGGCCGGCTCTCCGAATGCCGCGTCGTCGAGAATTATAAGTCTCGACTCGGTGATGGAGATGGCGGGGCCGGTGACGGAGTTGCCGGAGAGCGACGTGAAGCAGGGGGACACGGCGGCGCTTTTATACTCCTCCGGGACCACGGGGTTGAGCAAGGGCGTGGTGCTGACGCACCGGAACTTCATCGCGGCGTCGGTGATGATCGGCATGGACGACGACCTCGCCGGGGAGGTAAACGACGTGTACCTGTGCTTTTTGCCGATGTTTCACGTGTTCGGGCTGGCGGTTGTGACGTACGCGGCGCTGCGGCGAGGGAGCGCGGTGGTGGTGATGGGGAGGTTCGAGTTGGAGGCGCTTCTAAAGGCGATTGAGAAGAATAGGGTGACGAAGCTGTGGCTCGTGCCTCCGATCCTGCTTGCTCTGGCGAAACAGAGCGTGGTTCGGAACTACGATCTTTCGTCGTTGAAGCGTATTGGCTCGGGTGCTGCTCCTCTCGGGAAAGACTTGATGGAAGAGTGTGGCAGGCGTTTTCCTCATGTTGCCATTTGTCAGGGCTATGGTATGACAGAAACTTGTGGCATTGTTTCTGTGGAGAATCCAAGAGTAGGGGTTCGTCATACTGGCTCAACGGGAACGCTGGTTTCAGGAGTGGAAGCTCAAATAGTGAGTGTGGATGCACAGAAGCCTCTCCCTCCTAGACAGTTGGGAGAGATATGGGTGCGGGGTCCTAACATGATGCAAGGTTATCACAACAATCCACAGGCCACGAGATTGACTATAGATAAAAAGGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAAGATGGACAACTTTATGTGGTTGACCGTATCAAAGAACTGATCAAGTACAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAAGGGCTTCTTGTTTCTCACCCTGAAATACTAGAGGCTGTTGTTGTCCCATATCCAGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGCTCGCCCACTAGTTCACTGACTGAAGAAGAAGTTCAGAAGTTTATAGCTAATCAGGTTGCACCTTTCAAAAAACTGCGAAGGGTAACATTCATCAACAGTGTTCCTAAGACAGCTTCAGGAAAGATTCTCAGAAGAGAGCTTACTGCAAAAGCGCGATCCAAAATATAA 1668 0.5204 MQKSGYGRDGIYRSLRPSLVLPKDPNLSLVSFLFQSVSSFPSKTALVDAHSSQTLSFAQLKSQVAKLAHGFLKLSIKKNDVVLLLAPNSIHFPICFLAANAIGAVVSTANPIYTVNELSKQVNDSNPKLVITVPELWDKAKNLNLPAVIIDSANAHSDLKGLIHSWAGSPNAASSRIISLDSVMEMAGPVTELPESDVKQGDTAALLYSSGTTGLSKGVVLTHRNFIAASVMIGMDDDLAGEVNDVYLCFLPMFHVFGLAVVTYAALRRGSAVVVMGRFELEALLKAIEKNRVTKLWLVPPILLALAKQSVVRNYDLSSLKRIGSGAAPLGKDLMEECGRRFPHVAICQGYGMTETCGIVSVENPRVGVRHTGSTGTLVSGVEAQIVSVDAQKPLPPRQLGEIWVRGPNMMQGYHNNPQATRLTIDKKGWVHTGDLGYFDEDGQLYVVDRIKELIKYKGFQVAPAELEGLLVSHPEILEAVVVPYPDDEAGEVPIAYVVRSPTSSLTEEEVQKFIANQVAPFKKLRRVTFINSVPKTASGKILRRELTAKARSKI 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01415 555 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Pumo11g01415 555 Gene3D - 9 452 IPR042099 -
Pumo11g01415 555 SUPERFAMILY Acetyl-CoA synthetase-like 22 553 - -
Pumo11g01415 555 CDD 4CL 21 547 - -
Pumo11g01415 555 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 452 - -
Pumo11g01415 555 Gene3D - 453 554 IPR045851 -
Pumo11g01415 555 Pfam AMP-binding enzyme 35 457 IPR000873 -
Pumo11g01415 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 549 - -
Pumo11g01415 555 FunFam 4-coumarate--CoA ligase 2 453 554 - -
Pumo11g01415 555 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01415 Pumo-Chr11 44427583 44433150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01415 1 555 Monolignol Biosynthesis Gene Families AT4G05160 68.649 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01415 K01904 - gmx:100808944 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03837 4 78617513 78622672 Pumo11g01415 11 44427583 44433150 PCT