Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01412 ATGGCTGCGGAACCGAAGGAATCACCTTCCAACAACCCCGGTCTCCATACAACTCCTGACCAAGCTACTAAGGGTTACTTCATGCAACAAACTGTGTTTCGAATCAAGGACCCCAAAGTGAGCCTTGATTTTTATTCTCGCGTCTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCTGAGATGAAGTTCAGCCTGTACTTTGTGGGCTACGAGGATACGACAGAAGCTCCAAGTAATCCAGTTGAAAGAACGGTTTGGACATTTACTCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGAACCTCTTGGCTATGGACACATTGGCATAACTGTTGATGACACCTACAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGATGATGGGGAAATAAAAGGTTTAGCATTTATTAAGGATCCTGATGGATACTGGATTGAACTCTTTGATCTAAAAACATTAGGAGGTGAACAAACTGCTGCTTATGCTTAA 561 0.4225 MAAEPKESPSNNPGLHTTPDQATKGYFMQQTVFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFVGYEDTTEAPSNPVERTVWTFTQKATIELTHNWGTESDPEFKGYHNGNSEPLGYGHIGITVDDTYKACERFQNLGVEFVKKPDDGEIKGLAFIKDPDGYWIELFDLKTLGGEQTAAYA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01412 186 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462|GO:0046872
Pumo11g01412 186 MobiDBLite consensus disorder prediction 1 21 - -
Pumo11g01412 186 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 5 178 - -
Pumo11g01412 186 NCBIfam lactoylglutathione lyase 28 175 IPR004361 GO:0004462|GO:0046872
Pumo11g01412 186 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Pumo11g01412 186 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462|GO:0046872
Pumo11g01412 186 Gene3D - 4 177 IPR029068 -
Pumo11g01412 186 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 31 171 IPR004360 -
Pumo11g01412 186 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 23 173 IPR029068 -
Pumo11g01412 186 CDD GlxI_Zn 28 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01412 Pumo-Chr11 44394297 44402084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01412 1 178 Calmodulin-binding Proteins AT1G08110 80.899 4.29e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01412 K01759 - gmx:100779383 353.214