Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01406 ATGGCCACCATACTCACAAACAGCAAGAATAGTGGGCGATTCGGTGTTGTAAAGTTCATAGCACAAATAATACAAGGTCGATTGTTCATGCTTTGTGCCTCCTTCTTTATCATGGCAGGAGCAGGTGGGGTCTATGTGTTCGGTTCATACTCTGAAGCAATCAAATCTTCACAAGGCTATGATCAAAGCACGCTCAACTTTTTGGGGTTTTGCAAGGACCTTGGTGGAAATTTGGGTGCTCCAATTGGTCTCATTGGAGAGGTTACCCCTCCATGGTTAGTGCTCCTTTTTGGCTCAGCCGTCAACTTTGCTGGCTATTTCATGATCTGGCTTGTGGTCACTGGCAGAATATCCAAACCCCACGTGTGGCAGGTTTGTCTTTACATCGCAATTGGTGCTAGTTCTCAGAACTTTGCCAACACTGGAGTAATAACCACGTGTGTCAAAAACTTCCCAGAAAGTAGGGGCACAATATTGGGTTTGTTGAAGGGTTACCTTGGACTCAGTGGAGCTATCATGACCCAGCTTTACTTAGGCCATTTATGGGAATGA 552 0.4547 MATILTNSKNSGRFGVVKFIAQIIQGRLFMLCASFFIMAGAGGVYVFGSYSEAIKSSQGYDQSTLNFLGFCKDLGGNLGAPIGLIGEVTPPWLVLLFGSAVNFAGYFMIWLVVTGRISKPHVWQVCLYIAIGASSQNFANTGVITTCVKNFPESRGTILGLLKGYLGLSGAIMTQLYLGHLWE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01406 183 Gene3D - 53 88 IPR037071 GO:0016020
Pumo11g01406 183 Pfam Nodulin-like 29 178 IPR010658 -
Pumo11g01406 183 SUPERFAMILY MFS general substrate transporter 26 176 IPR036259 -
Pumo11g01406 183 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01406 Pumo-Chr11 44275818 44276369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01406 12 179 Nodulin-like Gene Family AT2G28120 66.667 2.80e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01406 - - gmx:100799928 321.627