Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01388 ATGGCAAATGGTACGGATTCAAAGCACTTTATGGAGCTGTCTAGGGTTCGGACGGGCTTGAAAAGGGAATTCGCCTTCGCCATGAAGTCCCAATCTGAGATCTGTGGTTCTCTAGGCCGAACCAGGTTCATCAAGGCCCAAAATGCAGTTCAAATCCCAAATCCTTCTACTTACAAAAAGTCCAAAAAAATTGGTTCATTCAAACCGAAGAGCGAAAACCTAGCCGATTTGGTGAAAACTAAGAAGGATGTCAGTGATGCTCTGAGTGAGGAGGAGGCAAATGGTGATGTGGTGGACGTTGAGGAACCTAAGAGTCAAATGGAGAATAAAGCTACAATGGTTGTTGTTTGTGGAGAAGAGCACAAGAGTGATAAACCTAATAGCCTTGTAGAGAATGAAGCTGCAATGGTTGTTTGTGAAGAAAAGCATAAGAGTTATGAACCTAAGATCCAAGTGAAGAATGAAGTTGCAATGGTGGTTGTTTGCGAAGAGGAGCATAAGAGTGATGAACCTAAAGCTAAGGTGGTTCAAACGCAAATGCAAATGCATCTTATCTGTGATGATGGTGGGGTCAAGGAGGAAGATGGTGATGCGGGGGTTGTTTCAGTTTTGGGTTGCAAGGTGAAACCCCAACAAAGGTTTACCCAGTCAACGCTAAAAAAAATGGAAGATGGTAAGAGTAATGTGTCAAGTGATGGTGTTGAAAAGGAAGTTAAGGGTGGTTCTGTGGTCGTTGCTTCAACTATGAGGAAAATGTCTAATGGTTCTACAGGGAAAAAGTTCCTTAGCAAGCTGAATGACCTTTTGTCTTCTGGGATTCTTGAGGGATTATGTGTGATTTATGTTCACGGCAAGAAGAATGTGTTCCAGAAAGACAAATATGTCGAGCATAACGAAAATGTTGTGGCAGCTGGAAGGATTGAAAGCATTGATCCTTTTAAACAGATAAACCAAAAATGCATTCGTATTGTCAAAGAGTTTGAACTTGGTGGATGTGCACTGTGTAGTGGCCAAGATTTCAGCAAAAGCTTTGGTCCTCGGACAGTAATTATTTGTGATCAGTGCGAAAAGGAATATCATGTTGGGTGTTTGAAGGATCATAATATGCAAAACCTAGAGGAATTACCTGAAGGGAACTGGTTTTGTTGTTTAGATTGTGATCAAATTCATACTACTTTGGTGAATTTGGTGGCTCGTGGAGAAATGAATCTTCCAGATTCCCTTTTAAGTTTGATTAGAAAGAAATATGATGATAAAGGTGTAGAAATTGGTGCTGATCTTGATATAAAATGGAGGGTTCTAAACTGGAAATTGGCTGAATCTAAGGATACCAGGCAATTGCTTTCAAAAGTTGTTGCTATTTTTCATGAGCGATTTGATCCAATAGTTCATTCTACTACTGGCATTGATTATATTCCAACAATGCTTTATGGAAGGAACATCAAGGGTCAAGATTTTAGTGGAATGTATTGTGCGTTGCTCACTGTCAATCAAGAAGTTGTAACCGCTGGAATATTCCGTGTGTTTGGGCTAGAAATGGCAGAGCTTCCCTTGGTGGCAACTATTATCGGTTGTCAGGGACAGGGTTACTTTCAATCCTTGTTTTCTTGTATTGAGGGTCTGCTTAGATCTTTAAAAGTCAAACACTTTGTCCTACCAACTGCTGATGAAGCTGAATCAATATGGACCAGTAAATTTGGGTTTACAAGGCTAAACCAAGATGAGGTTGGTCTTTCAATTGACCTGGCCATGGACAGAATACCAACTTTGGGTTTGGTCGTTCCTTCTATCTTATTGTCCTCCATGTGTGGGGATGACGATAATATGTAA 1830 0.4055 MANGTDSKHFMELSRVRTGLKREFAFAMKSQSEICGSLGRTRFIKAQNAVQIPNPSTYKKSKKIGSFKPKSENLADLVKTKKDVSDALSEEEANGDVVDVEEPKSQMENKATMVVVCGEEHKSDKPNSLVENEAAMVVCEEKHKSYEPKIQVKNEVAMVVVCEEEHKSDEPKAKVVQTQMQMHLICDDGGVKEEDGDAGVVSVLGCKVKPQQRFTQSTLKKMEDGKSNVSSDGVEKEVKGGSVVVASTMRKMSNGSTGKKFLSKLNDLLSSGILEGLCVIYVHGKKNVFQKDKYVEHNENVVAAGRIESIDPFKQINQKCIRIVKEFELGGCALCSGQDFSKSFGPRTVIICDQCEKEYHVGCLKDHNMQNLEELPEGNWFCCLDCDQIHTTLVNLVARGEMNLPDSLLSLIRKKYDDKGVEIGADLDIKWRVLNWKLAESKDTRQLLSKVVAIFHERFDPIVHSTTGIDYIPTMLYGRNIKGQDFSGMYCALLTVNQEVVTAGIFRVFGLEMAELPLVATIIGCQGQGYFQSLFSCIEGLLRSLKVKHFVLPTADEAESIWTSKFGFTRLNQDEVGLSIDLAMDRIPTLGLVVPSILLSSMCGDDDNM 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01388 609 Coils Coil 74 94 - -
Pumo11g01388 609 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 330 389 IPR013083 -
Pumo11g01388 609 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 482 573 IPR016181 -
Pumo11g01388 609 PANTHER AUTOIMMUNE REGULATOR 287 576 - -
Pumo11g01388 609 SUPERFAMILY FYVE/PHD zinc finger 331 384 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01388 Pumo-Chr11 44115649 44122838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01388 286 587 PHD Transcription Factor Family AT2G36720 49.836 4.83e-97 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01388 - - aprc:113859749 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03820 4 78427181 78433644 Pumo11g01388 11 44115649 44122838 PCT