Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01379 ATGCAGATAAGGAGGTCATCATATCATGATGTTGTGAGGGTAACGGAGATTCAGAAGGTTTTGGATATCAGTGGGGTTCAGACGTATGTGATTAACAGTGCTAGAGTTCTTTTCCTGAATGAGAGGCCTCAGAATCAGCCTAAGAGCAATAATGTCGTTGGTAGTGGAAAAAGTATCTCCCATTTGTGTGAAATTTGCAGAAGGAATCTCTTGGACCCCTTTCGTTTCTGTTCTTTGGGATGCAAGCTTGTAGGAATAAAGAAGAAGGGGAATGCGAGCTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAGAATGCATGAAGGAATGCCAAGAAGGTTGCCATCAAAAGAAGAATTGCGTGAAGGAATCCACAAACAAGTATACCAAAGCACGCCTTCTAATTCACATCTACAGGCTTGTTCAAATTCAAGGAGAAGAAAAGGGGTACCTCATAGGGCACCTTTAGGCCCATAA 480 0.4229 MQIRRSSYHDVVRVTEIQKVLDISGVQTYVINSARVLFLNERPQNQPKSNNVVGSGKSISHLCEICRRNLLDPFRFCSLGCKLVGIKKKGNASFVLSAKKDEEIGRMHEGMPRRLPSKEELREGIHKQVYQSTPSNSHLQACSNSRRRKGVPHRAPLGP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01379 159 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 157 - -
Pumo11g01379 159 Pfam PLATZ transcription factor 4 83 IPR006734 -
Pumo11g01379 159 MobiDBLite consensus disorder prediction 128 159 - -
Pumo11g01379 159 MobiDBLite consensus disorder prediction 128 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01379 Pumo-Chr11 43935578 43937453 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo11g01379 PLATZ 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01379 - - gmx:100787414 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01379 11 43935578 43937453 Pumo11g01379 11 43935578 43937453 ECH