Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01362 ATGGAAGCACCAATGGAGTTTTGGGGTGTTGAGGTTAAGGTGGGACAGACTGTGAAGGTTGACCCAATGGATCCTGTGAATGCATACGTACACATTTCTCAGGTTGCGCTCGGAGAGGCGAAAAAGGACAAATCAAATGAACCTGTGGTTATGTATTTGAAAGTTGGAGACCAGAAAATTGTTTTGGGAACCCTTTCTAGGGATGTTTTCCCTCATCTGTCGTTGGATTTGGTTCTGGACTCCGAGTCTGAGCTTTCCCACACTTCAAAAAGTGCTAGTGTCTTTTTTTGTGGATACAAAGTTCTAACTGATGAGGGCAACATTTCTGACTTTTCTGATGATAGTGAAGAGGACGAGGATCTTGCATTGGAGGGTCAAGATAATGGAAAACCTGAAATAAAAGCTGAAGGTGCAAAGGTTACCAAATCTAAACCTGTTCCCGTGGTTGGTGCATCAGCAAAACAAGTTAAGACTCTTGTTCCAAAGAAAGATGAGGATGAGTCTGATGACGATGATGAATCTGATGATGAGGTTGCTGGTGAAGACAAATCTGGAAGTTCTGATGAGATGGATGATGATACTGATAGTGATGGAGAGAGTGACAGTGATGAAGAGACCCCTGTTAAGAAGGGCAAGAAGAGACCCAATGAGTCTGCATCAAAAACTCCAGCTTCTTCCAAGAAAGCTAAAACTGCTACTCCTGAAAAGACCGATGGTAAGAAAAGTGTACATGTAGCAACTCCTTATCCTACGAAGAAAGGTGGAAAGACTCCGAACAGTAAAAAAACAAAAGGCCAGAGTCCCAATTCTTCTGGAAGTTGTAAAAAGTCTTTCACTAAAGAAGTTGGTCTGCAACAACATAAGAAGGCTAAGCATGGTAATCAGTGA 888 0.4223 MEAPMEFWGVEVKVGQTVKVDPMDPVNAYVHISQVALGEAKKDKSNEPVVMYLKVGDQKIVLGTLSRDVFPHLSLDLVLDSESELSHTSKSASVFFCGYKVLTDEGNISDFSDDSEEDEDLALEGQDNGKPEIKAEGAKVTKSKPVPVVGASAKQVKTLVPKKDEDESDDDDESDDEVAGEDKSGSSDEMDDDTDSDGESDSDEETPVKKGKKRPNESASKTPASSKKAKTATPEKTDGKKSVHVATPYPTKKGGKTPNSKKTKGQSPNSSGSCKKSFTKEVGLQQHKKAKHGNQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01362 295 Gene3D Nucleoplasmin core domain 2 107 - -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 186 202 - -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 124 139 - -
Pumo11g01362 295 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 253 280 - -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 109 123 - -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 108 295 - -
Pumo11g01362 295 FunFam Histone deacetylase HDT1 5 105 - -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 203 217 - -
Pumo11g01362 295 MobiDBLite consensus disorder prediction 165 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01362 Pumo-Chr11 43627586 43630390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01362 5 292 C2H2 Transcription Factor Family AT5G03740 38.558 5.22e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01362 - - gmx:547649 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03788 4 78009807 78011033 Pumo11g01362 11 43627586 43630390 PCT