Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01355 ATGGTAACTGGTAGCCGGTTTCTGACAGCTGTTCTTCAGATTTTTCGATTTTGTAGATCTAAATGCCACAAAAACTTTAAAATGAAGAGGAACCCTCGGAAAGTAAAATGGACAAAGGCATATAGGCGAGTGCACGAAAAGGATATGACACAGGATTCAACCTTTGAGTTCGAGAGAAAGAGAAACAGGCCTGAGAGATATGACAGGAATCTTGCTGAGAATGTCCTCAAGGCCATTCCAAAGATTGATAAAATCAGAGTCACCAGGGAGGAGAGACACCATAAGAATAGGATGAAAGGCAAGAAGCAGAAGCTGCAGATGGAGGCAGCTAGGGAGTTGGAGCAGGGCATTAGTCTGGTCAAAGCTCCATCTGTGCTTCAAATGGACCCTTCTTTCAATTTACCCAAGATCAAAGTTGGGGTTTCCCAGCAACAATCAGAGGACAATCATCCCATGGAAGAGTGA 465 0.4387 MVTGSRFLTAVLQIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHEKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKQKLQMEAARELEQGISLVKAPSVLQMDPSFNLPKIKVGVSQQQSEDNHPMEE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01355 154 Coils Coil 95 115 - -
Pumo11g01355 154 Gene3D Ribosomal protein L24e 1 54 IPR038630 -
Pumo11g01355 154 PANTHER 60S RIBOSOMAL PROTEIN L24 4 149 IPR000988 -
Pumo11g01355 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 42 - -
Pumo11g01355 154 MobiDBLite consensus disorder prediction 89 109 - -
Pumo11g01355 154 Pfam Ribosomal protein L24e 3 51 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01355 Pumo-Chr11 43513101 43513830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01355 4 154 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 58.940 2.06e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01355 K02896 - gmx:100793564 281.567