Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01348 ATGATGGACGAGGGATTACTCAATGAAGTCTATGACATTTATAATTTGAATGCAGATTATACTAGAGGTTTGCGGCAGGCCATTGGTGTTCGTGAATTTGAGCCTCTTCTTAGCACTTGTGTTGTCAAAGACATGTATGAAAGAGAGAGGGAAATGACTGAAGGATCCGGCATAGAAAAGGGAGAGACCTTATTTAATCGTAATTTGATGGAGTTGGTGAGGTCATCCTCTAATACTGAATCCACAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGCTTAATACCCGGAGACTTGTTCGCCGTCAGAAGAGGATGCTCAGTCGACTGCAAACGCTGTTTGGTTGGAACATACACTATGTTGATTCCACAGAATCAATATCAAGCAAATCAGAAGACGTATGGACTCGGCAAGTGGTTGAATCTGCTGTGAAGATAGTTAAATCTTTCCTGAGTGAGAATGGAAGCTTGCCATCCACCTTTGGGACGTCAAATGACACTGGGATGAAAATAATCCAAAGAGACCTCTGGACTCAATACATATGCAAGGCCTGCGGAGATCGGGTGCTAAGAGGATTACATGAATGGGAACAACACAAACAAGGTCGTGGCCACCGAAAACGTATTTCTCGTCTTAAGAGCAAGGGACAAGTTCCTGGTTTGGTGGAAGAGAAGGTGGACTATTCTGCGTGTGAACAGTGA 702 0.4288 MMDEGLLNEVYDIYNLNADYTRGLRQAIGVREFEPLLSTCVVKDMYEREREMTEGSGIEKGETLFNRNLMELVRSSSNTESTILLEEAIEKVKLNTRRLVRRQKRMLSRLQTLFGWNIHYVDSTESISSKSEDVWTRQVVESAVKIVKSFLSENGSLPSTFGTSNDTGMKIIQRDLWTQYICKACGDRVLRGLHEWEQHKQGRGHRKRISRLKSKGQVPGLVEEKVDYSACEQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01348 233 Gene3D - 1 175 IPR027417 -
Pumo11g01348 233 Pfam IPP transferase 1 105 - -
Pumo11g01348 233 Gene3D Classic Zinc Finger 176 219 - -
Pumo11g01348 233 SUPERFAMILY beta-beta-alpha zinc fingers 162 217 IPR036236 -
Pumo11g01348 233 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 151 IPR039657 -
Pumo11g01348 233 FunFam tRNA dimethylallyltransferase 175 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01348 Pumo-Chr11 43431137 43433092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01348 1 214 C2H2 Transcription Factor Family AT2G27760 51.613 2.67e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01348 K00791 - gmx:100792690 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01348 11 43431137 43433092 Pumo11g01348 11 43431137 43433092 ECH