Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01347 ATGCAGGTCTACCGCGGCCTCGATGTTCTCACCAACAAACTCCCTCTCCCTCACCAAAACGGCGTGCCGCATCATCTCTTGGGTACTGTAAGCTCCAACGTGGAATTCACAGCCAAAGCGTTTCGGGATTCGGCTATTCCCATTATTGATGATATATTGGCTCGCAACCACTTGCCTGTTATAGTTGGGGGTACAAATTACTATATACAGGCTCTTGTGAGTCCGTTTCTTCTAGATGACTCTGCAGAAGATATGGATGAAAGCTGTTTGGGTGACCCACCTGGGTCTGATAACAGTTTCATTGCTGAAAATGACGGTTCAAACAATAGTTATGACCTACTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATATATCAGTTTGTACAATCGCACCGGTGTTCTTCCTAGCAAAATTTTTCAAGGAAAGGCAGCAGAGGGCAGAAGTGGGGTCAAGTTGATAACTTAA 501 0.4331 MQVYRGLDVLTNKLPLPHQNGVPHHLLGTVSSNVEFTAKAFRDSAIPIIDDILARNHLPVIVGGTNYYIQALVSPFLLDDSAEDMDESCLGDPPGSDNSFIAENDGSNNSYDLLKDIDPVAANRIHPNNHRKINQYISLYNRTGVLPSKIFQGKAAEGRSGVKLIT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01347 166 Pfam IPP transferase 2 154 - -
Pumo11g01347 166 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 79 IPR039657 -
Pumo11g01347 166 Gene3D - 97 154 - -
Pumo11g01347 166 Gene3D - 1 92 IPR027417 -
Pumo11g01347 166 FunFam LD10347p 99 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01347 Pumo-Chr11 43429316 43431059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01347 1 157 C2H2 Transcription Factor Family AT2G27760 61.491 4.50e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01347 K00791 - gmx:100792690 301.597