Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01343 ATGAACGTGATTAATTTACGATTTTGCCATTGTTCCCAACTCCTCCTCTTACCAAACACGAGGCTCCCTTCTTCGCAAACTGCAAAGTTAACTCTGAGAAACCAAACAACCCCTTTTGCCATTTCCTGCAAAAACCAATTGCTTTCTCCAATTCGCGCGTCCATGGCCTCACCCTCCGTCACAGACACCGAAACAAAGCCATTCTCCGTTCTCTTCGTGTGCCTCGGCAACATCTGCAGAAGCCCCGCTGCTGAAGGAGTCTTCACTCACTTAGTCAACGAAAGGGCCCTCAATTTGAAGTTCAAAATCGATTCCGCTGGCACCATCAATTATCACGAGGGAAATGATGCGGACCCGAGAATGAGAGCAGCCTCAAAGAGCCGCGGGATTCAGATAACTTCTATTTCGAGGCCAATCAAGCCCTCTGATTTCATTGACTTTGACCTCATTCTTGCTATGGACAAACAGAACAGAGAGGACATATTTGAGGCCTTTAATAAATGGAAAGGTAGACATTCCTTACCGGATGATGCACATAAAAAGGTTAAGTTGATGTGCTCGTATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCTTATTATGGTGGACCGCAAGGGTTTGAGAAGGTGTTGGATTTGCTTGAAGATGCTTGCGGATCATTGCTGGAAACCATTTTGGCAGAAAACAAACAGTGTACAAGAATCCTAATACCTTTATTAATGGCCAGAAGATCCAATCCTGTGGTAAAGTCATAA 759 0.4466 MNVINLRFCHCSQLLLLPNTRLPSSQTAKLTLRNQTTPFAISCKNQLLSPIRASMASPSVTDTETKPFSVLFVCLGNICRSPAAEGVFTHLVNERALNLKFKIDSAGTINYHEGNDADPRMRAASKSRGIQITSISRPIKPSDFIDFDLILAMDKQNREDIFEAFNKWKGRHSLPDDAHKKVKLMCSYCKKHDESEVPDPYYGGPQGFEKVLDLLEDACGSLLETILAENKQCTRILIPLLMARRSNPVVKS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01343 252 CDD LMWPTP 69 224 - -
Pumo11g01343 252 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 5 231 - -
Pumo11g01343 252 SUPERFAMILY Phosphotyrosine protein phosphatases I 66 226 IPR036196 -
Pumo11g01343 252 Pfam Low molecular weight phosphotyrosine protein phosphatase 70 223 IPR023485 -
Pumo11g01343 252 FunFam Low molecular weight protein-tyrosine-phosphatase 67 231 - -
Pumo11g01343 252 PRINTS LMW phosphotyrosine protein phosphatase signature 70 87 IPR017867 GO:0004725|GO:0006470
Pumo11g01343 252 PRINTS LMW phosphotyrosine protein phosphatase signature 197 212 IPR017867 GO:0004725|GO:0006470
Pumo11g01343 252 PRINTS LMW phosphotyrosine protein phosphatase signature 113 129 IPR017867 GO:0004725|GO:0006470
Pumo11g01343 252 Gene3D - 52 231 - -
Pumo11g01343 252 SMART LMWPc_2 68 225 IPR023485 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01343 51 230 Protein tyrosine phosphatase (PTP) family AT3G44620 63.235 2.85e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01343 K25307 - gmx:100797254 410.223